RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 BBS12Q6ZW61 710 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 IFT20Q8IY31 132 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 KLHL23Q8NBE8 558 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 GIPC2Q8TF65 315 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 RNF139Q8WU17 664 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 AUTS2Q8WXX7 1259 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 HINFPQ9BQA5 517 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 ZBP1Q9H171 429 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.311e-5■■□□□ 14.4
LYSMD3-204ENST00000509384 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 HSFX1Q9UBD0 423 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 SSX2IPQ9Y2D8 614 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 UTP11Q9Y3A2 253 aaKnown RBP13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 PTPRDP23468 1912 aa13.11□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM92AA1XBS5 289 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 LCHNA4D1U4 455 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ZSCAN5CA6NGD5 496 aaPredicted RBP13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 SLC38A8A6NNN8 435 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ZNF487B1APH4 448 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ABLIM3O94929 683 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ECEL1O95672 775 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 CTSAP10619 480 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ATF2P15336 505 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ATF6P18850 670 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 GBP1P32455 592 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 KCNJ1P48048 391 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 AIF1P55008 147 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 MMRN1Q13201 1228 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 RAB33AQ14088 237 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 JAMLQ86YT9 394 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM71BQ8TC56 605 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 GRK7Q8WTQ7 553 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 NTAN1Q96AB6 310 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 HAUS1Q96CS2 278 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 CCDC114Q96M63 670 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 TRIM51Q9BSJ1 452 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 RAB17Q9H0T7 212 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ACBD3Q9H3P7 528 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 SMOC2Q9H3U7 446 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 NMUR1Q9HB89 426 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 CYP4F11Q9HBI6 524 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 WDR6Q9NNW5 1121 aaKnown RBP13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 FNIP2Q9P278 1114 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 YIPF1Q9Y548 306 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 PATJQ8NI35 1801 aa13.1□□□□□ -0.31
LYSMD3-204ENST00000509384 ESYT3A0FGR9 886 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 LIASO43766 372 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 KCNA4P22459 653 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 L1CAMP32004 1257 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 ELF1P32519 619 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 ARL4AP40617 200 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 PGFP49763 221 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 SCAPQ12770 1279 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 TAF10Q12962 218 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 MTMR3Q13615 1198 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 MAP9Q49MG5 647 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 RASIP1Q5U651 963 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 RNF34Q969K3 372 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 FAF2Q96CS3 445 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 RNF157Q96PX1 679 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 FRMD8P1Q9BZ68 369 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 RXFP1Q9HBX9 757 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 GDF3Q9NR23 364 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 RCOR3Q9P2K3 495 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 FEZ2Q9UHY8 353 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 FBXW11Q9UKB1 542 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 RWDD3Q9Y3V2 267 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 COL4A4P53420 1690 aaPredicted RBP13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
LYSMD3-204ENST00000509384 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 APOC4-APOC2K7ER74 178 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 PRRG1O14668 218 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 APOL1O14791 398 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 TEX28O15482 410 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 IRAK2O43187 625 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 LILRB3O75022 631 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 SEC24AO95486 1093 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 GAS8O95995 478 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 IGLV3-25P01717 112 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 APOC2P02655 101 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 IL4RP24394 825 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 ADRA1BP35368 520 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 BMPR1AP36894 532 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 PTGIRP43119 386 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 ALDH1A3P47895 512 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 CXCR3P49682 368 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 PSEN1P49768 467 aa13.08□□□□□ -0.31
LYSMD3-204ENST00000509384 BYSLQ13895 437 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms