RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 STKLD1Q8NE28 680 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 UCMAQ8WVF2 138 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 HPS3Q969F9 1004 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ZNF775Q96BV0 537 aaPredicted RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 SGF29Q96ES7 293 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ACOX2Q99424 681 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ELF4Q99607 663 aaPredicted RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 SEMA3CQ99985 751 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 EIF2AK1Q9BQI3 630 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 SLC26A6Q9BXS9 759 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 MRPL4Q9BYD3 311 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 NIF3L1Q9GZT8 377 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 ZCWPW1Q9H0M4 648 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 OSBPL2Q9H1P3 480 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 CDT1Q9H211 546 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 TM9SF3Q9HD45 589 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 CD93Q9NPY3 652 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SMPD4Q9NXE4 827 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 FAM13BQ9NYF5 915 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 VPS54Q9P1Q0 977 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 CNTN3Q9P232 1028 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 CFAP97Q9P2B7 532 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 TUBGCP4Q9UGJ1 667 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 RCAN3Q9UKA8 241 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 VAV3Q9UKW4 847 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 UBQLN1Q9UMX0 589 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 PCDHA4Q9UN74 947 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 SH3BP1Q9Y3L3 701 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 PCDHB1Q9Y5F3 818 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 RBM8AQ9Y5S9 174 aaKnown RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 GPC6Q9Y625 555 aaPredicted RBP4.12□□□□□ -1.75
RNF4-211ENST00000509206 PHLPP2Q6ZVD8 1323 aa4.12□□□□□ -1.75
RNF4-211ENST00000509206 POLQO75417 2590 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 NUP210Q8TEM1 1887 aaPredicted RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 CEP192Q8TEP8 1941 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ZNF638Q14966 1978 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 ARHGEF35A5YM69 484 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 TGFBR3LH3BV60 316 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GFRA2O00451 464 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CYB561D2O14569 222 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CYP26A1O43174 497 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 SLC37A4O43826 429 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CSO75390 466 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 LYPLA2O95372 231 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GCFC2P16383 781 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 PFKLP17858 780 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ITGB6P18564 788 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CYP3A5P20815 502 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CD27P26842 260 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ANXA13P27216 316 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CDC27P30260 824 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 LRPAP1P30533 357 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GRIK1P39086 918 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CTSKP43235 329 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 LILRA4P59901 499 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ASIC1P78348 528 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ARID5AQ03989 594 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 PPP2R3AQ06190 1150 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 MESP2Q0VG99 397 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 POU4F2Q12837 409 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 STRN3Q13033 797 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 E2F5Q15329 346 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 C3orf38Q5JPI3 329 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 LAYNQ6UX15 382 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 LYSMD3Q7Z3D4 306 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CACUL1Q86Y37 369 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 MIB1Q86YT6 1006 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 SPATA2LQ8IUW3 424 aaPredicted RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 TRIM22Q8IYM9 498 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 BLIDQ8IZY5 108 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 KIAA1958Q8N8K9 716 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 TERB1Q8NA31 727 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 OR10T2Q8NGX3 314 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ZNF564Q8TBZ8 553 aaPredicted RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 RNF217Q8TC41 542 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GANCQ8TET4 914 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 RFFLQ8WZ73 363 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GTF3C6Q969F1 213 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 ACO2Q99798 780 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 GABRG3Q99928 467 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 KIFC3Q9BVG8 833 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 TARS2Q9BW92 718 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 NACA2Q9H009 215 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 BTBD1Q9H0C5 482 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 PCED1AQ9H1Q7 454 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 EPN3Q9H201 632 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 PLEKHA5Q9HAU0 1116 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 OSGEPQ9NPF4 335 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GDF3Q9NR23 364 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 AASDHPPTQ9NRN7 309 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 DNAJC17Q9NVM6 304 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 EHD2Q9NZN4 543 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 SEPT10Q9P0V9 454 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 GCNT4Q9P109 453 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 PCDHA12Q9UN75 941 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 STARD13Q9Y3M8 1113 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 CPQQ9Y646 472 aa4.11□□□□□ -1.75
RNF4-211ENST00000509206 TNRC6BQ9UPQ9 1833 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 SPTBN1Q01082 2364 aaKnown RBP4.11□□□□□ -1.75
RNF4-211ENST00000509206 HELZP42694 1942 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms