RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 STRADAQ7RTN6 431 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 TAC4Q86UU9 113 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 UBL4BQ8N7F7 174 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 ARL14EPQ8N8R7 260 aaPredicted RBP11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 SHKBP1Q8TBC3 707 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 TCEAL4Q96EI5 215 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 ADAM7Q9H2U9 754 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 SMOC2Q9H3U7 446 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 TASP1Q9H6P5 420 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 PCSK1NQ9UHG2 260 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 SFMBT1Q9UHJ3 866 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 CD207Q9UJ71 328 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZMYM5Q9UJ78 669 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 HYOU1Q9Y4L1 999 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 ALG6Q9Y672 507 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 CLUHO75153 1309 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 MYO16Q9Y6X6 1858 aa11.49□□□□□ -0.57
BRCC3P1-201ENST00000508559 ESPNB1AK53 854 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 KIF2AO00139 706 aaPredicted RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 MSI1O43347 362 aaKnown RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 COCHO43405 550 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 TBX10O75333 385 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 TADA3O75528 432 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 FYNP06241 537 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 CEBPBP17676 345 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 PFKLP17858 780 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 KCNA5P22460 613 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 CCR1P32246 355 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 DNA2P51530 1060 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 TRIP4Q15650 581 aaPredicted RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 MSANTD2Q6P1R3 559 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 FAM131BQ86XD5 332 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 SLC35F6Q8N357 371 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZNF276Q8N554 614 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 NIPA2Q8N8Q9 360 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 C16orf45Q96MC5 204 aaPredicted RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 GUCD1Q96NT3 240 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 CYP2S1Q96SQ9 504 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 NPY6RQ99463 290 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 LRRC3Q9BY71 257 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 GOLPH3Q9H4A6 298 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 WDCPQ9H6R7 721 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 UBE2ZQ9H832 354 aaPredicted RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZWILCHQ9H900 591 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 MTMR10Q9NXD2 777 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 SMPD4Q9NXE4 827 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 CLEC1BQ9P126 229 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 LSM7Q9UK45 103 aaKnown RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 HBS1LQ9Y450 684 aaKnown RBP11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 CAPN6Q9Y6Q1 641 aa11.48□□□□□ -0.57
BRCC3P1-201ENST00000508559 TRANK1O15050 2925 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 H3BQ06 376 aaPredicted RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 IRAK2O43187 625 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 MOCS2O96007 188 aaPredicted RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 OAS1P00973 400 aaKnown RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 KRT7P08729 469 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 TFE3P19532 575 aaPredicted RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 MIPP30301 263 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 CASQ1P31415 396 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 GBP2P32456 591 aaPredicted RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 PCK1P35558 622 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 CETN2P41208 172 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 CCR2P41597 374 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 HARS2P49590 506 aaKnown RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 PITX1P78337 314 aaPredicted RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 DLX2Q07687 328 aaPredicted RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 RPS6KA1Q15418 735 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 SLC5A9Q2M3M2 681 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZC3H12AQ5D1E8 599 aaKnown RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 SH3PXD2AQ5TCZ1 1133 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 TRNP1Q6NT89 227 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 KLHDC10Q6PID8 442 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 TMEM150AQ86TG1 271 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 DDX42Q86XP3 938 aaKnown RBP eCLIP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 RHOT1Q8IXI2 618 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 CMTM8Q8IZV2 173 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 ATP6V0D2Q8N8Y2 350 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 ITFG1Q8TB96 612 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 HSPH1Q92598 858 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 ZNF592Q92610 1267 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 HLA-CQ95604 372 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 NECTIN4Q96NY8 510 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 DCLK3Q9C098 648 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 WDR6Q9NNW5 1121 aaKnown RBP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 TLR6Q9Y2C9 796 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 SH3BP1Q9Y3L3 701 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 CPQQ9Y646 472 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 LAMA3Q16787 3333 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 ATG2AQ2TAZ0 1938 aa11.47□□□□□ -0.57
BRCC3P1-201ENST00000508559 CTAGE9A4FU28 777 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms