RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 KIAA0753Q2KHM9 967 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 FAM153CQ494X1 144 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 HSP90AB4PQ58FF6 505 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 VPS53Q5VIR6 699 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 LRRC31Q6UY01 552 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 SMIM5Q71RC9 77 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 DDX42Q86XP3 938 aaKnown RBP eCLIP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC83Q8IWF9 413 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 TMEM57Q8N5G2 664 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 AOPEPQ8N6M6 819 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 MSANTD4Q8NCY6 345 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 CNNM3Q8NE01 707 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 FAM76AQ8TAV0 307 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 ABHD8Q96I13 439 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 JAKMIP1Q96N16 626 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 DMRTA2Q96SC8 542 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 IQCGQ9H095 443 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PUS7LQ9H0K6 701 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 KLC4Q9NSK0 619 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 MYO1AQ9UBC5 1043 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 SWAP70Q9UH65 585 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PRKAB1Q9Y478 270 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHB1Q9Y5F3 818 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHGA9Q9Y5G4 932 aaKnown RBP4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHGA8Q9Y5G5 932 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHGA7Q9Y5G6 932 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHGA6Q9Y5G7 932 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 PCDHGA3Q9Y5H0 932 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 FAM169AQ9Y6X4 670 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 FMN2Q9NZ56 1722 aa4.99□□□□□ -1.61
PDLIM5-211ENST00000508531 IGSF1Q8N6C5 1336 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 GOLGA8KD6RF30 607 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 E7ENX8 843 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 F5H697 171 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 PRKCGP05129 697 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 FESP07332 822 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 RHOP08100 348 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 CELA2AP08217 269 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 ABCD1P33897 745 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 TAP2Q03519 686 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 WHAMMP3Q1A5X7 153 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 ABCB5Q2M3G0 1257 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 ISM2Q6H9L7 571 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 PPP4R3AQ6IN85 833 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 WDR93Q6P2C0 686 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 CRELD2Q6UXH1 353 aaPredicted RBP4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 C1QL2Q7Z5L3 287 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 SRGAP1Q7Z6B7 1085 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 COL23A1Q86Y22 540 aaPredicted RBP4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 CAMKK1Q8N5S9 505 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 ZFAND2BQ8WV99 257 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC34Q96HJ3 373 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 TSPAN18Q96SJ8 248 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 VRK1Q99986 396 aaPredicted RBP4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 C1QTNF7Q9BXJ2 289 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 PARD6BQ9BYG5 372 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 LRRCC1Q9C099 1032 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 FAM204AQ9H8W3 233 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 IRAK4Q9NWZ3 460 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 NOB1Q9ULX3 412 aaKnown RBP4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 CNPY2Q9Y2B0 182 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 ATP7BP35670 1465 aa4.98□□□□□ -1.61
PDLIM5-211ENST00000508531 EVC2Q86UK5 1308 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PEAK1Q9H792 1746 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 A0A0B4J269 797 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 ERICH2A1L162 156 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TARSL2A2RTX5 802 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 GCOM1H8Y6P7 765 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 POLRMTO00411 1230 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 RTN2O75298 545 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 RTN3O95197 1032 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TTLL1O95922 423 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 NR2F6P10588 404 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 FERP16591 822 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 SYT1P21579 422 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 SCP2P22307 547 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 HSPA4P34932 840 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 LBX1P52954 281 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PSMC1P62191 440 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 AKAP17AQ02040 695 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TUBB3Q13509 450 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 SRSF7Q16629 238 aaKnown RBP eCLIP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC40Q4G0X9 1142 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 SH2D4BQ5SQS7 431 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 BEND6Q5SZJ8 279 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 SLC30A9Q6PML9 568 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC73Q6ZRK6 1079 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 NECAB2Q7Z6G3 386 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 MORC1Q86VD1 984 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 CCAR1Q8IX12 1150 aaKnown RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TEX9Q8N6V9 391 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 CCDC148Q8NFR7 591 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 POC1BQ8TC44 478 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 ZKSCAN4Q969J2 545 aaPredicted RBP4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 COA7Q96BR5 231 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PPP1R14BQ96C90 147 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 PBKQ96KB5 322 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 TEKT5Q96M29 485 aa4.97□□□□□ -1.61
PDLIM5-211ENST00000508531 ALS2CR12Q96Q35 445 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms