RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 FGBP02675 491 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 IGKV2-30P06310 120 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 SLC5A2P31639 672 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 JAK3P52333 1124 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 WDR5P61964 334 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 KPNB1Q14974 876 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 MRNIPQ6NTE8 343 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 USP17L6PQ6QN14 398 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 SHC4Q6S5L8 630 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 BEND5Q7L4P6 421 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 CCDC28AQ8IWP9 274 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 NANOGP1Q8N7R0 232 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 C16orf52Q8NHV5 167 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 ABHD5Q8WTS1 349 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 CUL5Q93034 780 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 GDF15Q99988 308 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 NAA15Q9BXJ9 866 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 TMEM8AQ9HCN3 771 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 SPATA31A1Q5TZJ5 1347 aa6.19□□□□□ -1.42
TOPBP1-206ENST00000508524 C16orf96A6NNT2 1141 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 RRHO14718 337 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 APOL1O14791 398 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 KIF3BO15066 747 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 COQ9O75208 318 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 GABRB3P28472 473 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 DGKQP52824 942 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 ZNF91Q05481 1191 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 IFIT5Q13325 482 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 FAM90A2PQ658T7 463 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 RAP1GAP2Q684P5 730 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 ANO7Q6IWH7 933 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 DEF8Q6ZN54 512 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 C9orf106Q8NAJ2 232 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 ZBTB9Q96C00 473 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 ADGRE3Q9BY15 652 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 TMOD4Q9NZQ9 345 aa6.18□□□□□ -1.42
TOPBP1-206ENST00000508524 CCNT2O60583 730 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 BMP15O95972 392 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 TACR3P29371 465 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 LAMB3Q13751 1172 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 RBMS2Q15434 407 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 PFKFB3Q16875 520 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 LCE1AQ5T7P2 110 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 PIP4P1Q86T03 277 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 NRACQ8N912 160 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 PJA1Q8NG27 643 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 NAF1Q96HR8 494 aaKnown RBP6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 NUAK2Q9H093 628 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 MLXIPLQ9NP71 852 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 STARD7Q9NQZ5 370 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 ABHD10Q9NUJ1 306 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 TMEM184CQ9NVA4 438 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 PI4KBQ9UBF8 816 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 PCDHB2Q9Y5E7 798 aa6.17□□□□□ -1.42
TOPBP1-206ENST00000508524 LY6G6EA0A0G2JKS1 128 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 OR2W5A6NFC9 320 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 SOCS2O14508 198 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 TLR2O60603 784 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 CNOT3O75175 753 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 NDST3O95803 873 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 PRF1P14222 555 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 DRD1P21728 446 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 PMS2P11Q13670 270 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 SLC5A9Q2M3M2 681 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 TRIM71Q2Q1W2 868 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 HIBCHQ6NVY1 386 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 TFAP2DQ7Z6R9 452 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 MRPL10Q7Z7H8 261 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 WIPF2Q8TF74 440 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 HMCESQ96FZ2 354 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 PCDHAC1Q9H158 963 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 AGO4Q9HCK5 861 aaKnown RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 ZMYND8Q9ULU4 1186 aaPredicted RBP6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 MAN2B2Q9Y2E5 1009 aa6.16□□□□□ -1.42
TOPBP1-206ENST00000508524 INPPL1O15357 1258 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 CTSAP10619 480 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 EGR1P18146 543 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 TM4SF4P48230 202 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 RPS13P62277 151 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 HSF1Q00613 529 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 ID2Q02363 134 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 SRSF1Q07955 248 aaKnown RBP eCLIP6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 TMEM196Q5HYL7 178 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 AWAT2Q6E213 333 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 TECPR1Q7Z6L1 1165 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 UBE2Q1Q7Z7E8 422 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 CLASRPQ8N2M8 674 aaKnown RBP6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 CCDC150Q8NCX0 1101 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 SNX27Q96L92 541 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 RNF26Q9BY78 433 aaPredicted RBP6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 RXFP3Q9NSD7 469 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 VPS4AQ9UN37 437 aa6.15□□□□□ -1.42
TOPBP1-206ENST00000508524 ZMYM2Q9UBW7 1377 aa6.15□□□□□ -1.43
TOPBP1-206ENST00000508524 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 NCK2O43639 380 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 MYL3P08590 195 aa6.14□□□□□ -1.43
TOPBP1-206ENST00000508524 CYP19A1P11511 503 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms