RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MKL2Q9ULH7 1088 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NDUFAF1Q9Y375 327 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ZFYVE16Q7Z3T8 1539 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 RGSL1A5PLK6 1076 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CCDC182A6NF36 153 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 A8MUI8 341 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TMEM114B3SHH9 223 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 DDHD2O94830 711 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 RARBP10826 455 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 VCLP18206 1134 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 MAPK1P28482 360 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 RRM2P31350 389 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 RECQLP46063 649 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TUBA1BP68363 451 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 C1QBPQ07021 282 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TNK2Q07912 1038 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 COX10Q12887 443 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NME3Q13232 169 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TUBA3CQ13748 450 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 RC3H1Q5TC82 1133 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 GPR107Q5VW38 600 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 SUSD4Q5VX71 490 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TUBA1AQ71U36 451 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 BNIPLQ7Z465 357 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CLNKQ7Z7G1 428 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TTC7BQ86TV6 843 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CCDC24Q8N4L8 307 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 KIAA0895Q8NCT3 520 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 TMC2Q8TDI7 906 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NUAK2Q9H093 628 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 HPS4Q9NQG7 708 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CD274Q9NZQ7 290 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 CCDC59Q9P031 241 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 ITGA11Q9UKX5 1188 aa7.52□□□□□ -1.21
UBE2D3-224ENST00000508474 NEO1Q92859 1461 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 FAM237BA0A1B0GVD1 139 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 E2F8A0AVK6 867 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 EFCAB10A6NFE3 127 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 NDUFS3O75489 264 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 SSTR3P32745 418 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 CCNA1P78396 465 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 FAAP100Q0VG06 881 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 MSLNQ13421 630 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 FRG1Q14331 258 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KCTD2Q14681 263 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 TYSND1Q2T9J0 566 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 SMTNL2Q2TAL5 461 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 AARS2Q5JTZ9 985 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DENND5AQ6IQ26 1287 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DSTYKQ6XUX3 929 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ATG14Q6ZNE5 492 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 OTOAQ7RTW8 1153 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RASGEF1CQ8N431 466 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ATPAF2Q8N5M1 289 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 AADATQ8N5Z0 425 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DQX1Q8TE96 717 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DCUN1D1Q96GG9 259 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF560Q96MR9 790 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ASB2Q96Q27 587 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RMDN3Q96TC7 470 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 CPNE1Q99829 537 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 SEMA6AQ9H2E6 1030 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DYRK4Q9NR20 520 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 CHORDC1Q9UHD1 332 aaPredicted RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ZNF221Q9UK13 617 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ING4Q9UNL4 249 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DRG1Q9Y295 367 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 GRIN2DO15399 1336 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 DFFAO00273 331 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 INPP4BO15327 924 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 GAS2O43903 313 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 TPBGLP0DKB5 382 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 MSH3P20585 1137 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 AKT1P31749 480 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 POU4F1Q01851 419 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 BNIP2Q12982 314 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 BMPR2Q13873 1038 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 TAF5Q15542 800 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 STRA8Q7Z7C7 330 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 STK32CQ86UX6 486 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 TRABD2AQ86V40 505 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ECHDC2Q86YB7 292 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 KATNAL2Q8IYT4 538 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 FITM2Q8N6M3 262 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 SLC44A5Q8NCS7 719 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 PROX1Q92786 737 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 OTULINQ96BN8 352 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 PPP1R10Q96QC0 940 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 RIT2Q99578 217 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 PRRG3Q9BZD7 231 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 COA1Q9GZY4 146 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 NDFIP2Q9NV92 336 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 WBP11Q9Y2W2 641 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 ATG7O95352 703 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 FDX1P10109 184 aa7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 HOXB6P17509 224 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-224ENST00000508474 SSTR1P30872 391 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms