RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 NCF2P19878 526 aaPredicted RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 XIAPP98170 497 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 ATP1A4Q13733 1029 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 TCEAL1Q15170 157 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 FNBP1LQ5T0N5 605 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 ANKRD22Q5VYY1 191 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 ATG16L1Q676U5 607 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 BBS5Q8N3I7 341 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 LRRC71Q8N4P6 559 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 RNF169Q8NCN4 708 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 PPP4R1Q8TF05 950 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 TRAPPC12Q8WVT3 735 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 JPH1Q9HDC5 661 aaPredicted RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 CDH22Q9UJ99 828 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 FAM155BO75949 473 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 HLA-DRAP01903 254 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 KRT1P04264 644 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 NFKBIAP25963 317 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 MSX2P35548 267 aaPredicted RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 NR1H2P55055 460 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 HSF5Q4G112 596 aaPredicted RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 CYP4A22Q5TCH4 519 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 CDHR3Q6ZTQ4 885 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 C4orf19Q8IY42 314 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 DCAKDQ8WVC6 231 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 DDX1Q92499 740 aaKnown RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 PAIP1Q9H074 479 aaKnown RBP13.13□□□□□ -0.31
DDR1-262ENST00000508312 ACSS3Q9H6R3 686 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 KCND2Q9NZV8 630 aa13.13□□□□□ -0.31
DDR1-262ENST00000508312 RBP3P10745 1247 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 RELAQ04206 551 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 NFX1Q12986 1120 aaKnown RBP13.12□□□□□ -0.31
DDR1-262ENST00000508312 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 PACS1Q6VY07 963 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 CHSY1Q86X52 802 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 MAP4K3Q8IVH8 894 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 PPM1NQ8N819 430 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 JADE3Q92613 823 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 CCDC106Q9BWC9 280 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 PPCSQ9HAB8 311 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 TBCCD1Q9NVR7 557 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 TJP2Q9UDY2 1190 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 SH3PXD2BA1X283 911 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 TRIM49D1C9J1S8 452 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 SPTLC1O15269 473 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 SLC26A4O43511 780 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
DDR1-262ENST00000508312 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
DDR1-262ENST00000508312 RNASEH2BQ5TBB1 312 aaKnown RBP13.12□□□□□ -0.31
DDR1-262ENST00000508312 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 MCOLN2Q8IZK6 566 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 MARVELD2Q8N4S9 558 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 DDI1Q8WTU0 396 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 TMEM8AQ9HCN3 771 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 CYP26B1Q9NR63 512 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 TRIM17Q9Y577 477 aa13.12□□□□□ -0.31
DDR1-262ENST00000508312 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 OCM2P0CE71 109 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 OCMP0CE72 109 aaPredicted RBP13.11□□□□□ -0.31
DDR1-262ENST00000508312 KCNA2P16389 499 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CPOXP36551 454 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 ETV4P43268 484 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 MRPS22P82650 360 aaKnown RBP13.11□□□□□ -0.31
DDR1-262ENST00000508312 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 POTEHQ6S545 545 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CAAP1Q9H8G2 361 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 COPS7BQ9H9Q2 264 aaPredicted RBP13.11□□□□□ -0.31
DDR1-262ENST00000508312 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 GNEQ9Y223 722 aaKnown RBP13.11□□□□□ -0.31
DDR1-262ENST00000508312 F8VP50 259 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 NFKBIEO00221 500 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 P4HA2O15460 535 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CBFA2T3O75081 653 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CST3P01034 146 aaPredicted RBP13.11□□□□□ -0.31
DDR1-262ENST00000508312 BMPR2Q13873 1038 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 WDR44Q5JSH3 913 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 FAM83AQ86UY5 434 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CROCCP3Q8IVE0 287 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 PQLC1Q8N2U9 271 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 SLC9A2Q9UBY0 812 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 SHOC2Q9UQ13 582 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 APOBEC2Q9Y235 224 aaKnown RBP13.11□□□□□ -0.31
DDR1-262ENST00000508312 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 CEPT1Q9Y6K0 416 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 UBE4BO95155 1302 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 AP1G1O43747 822 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 PGK2P07205 417 aa13.11□□□□□ -0.31
DDR1-262ENST00000508312 SERPINA6P08185 405 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms