RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SLC25A18Q9H1K4 315 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 BICC1Q9H694 974 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 PRDM8Q9NQV8 689 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 AGPAT3Q9NRZ7 376 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 CYP39A1Q9NYL5 469 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 TRPM5Q9NZQ8 1165 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 COL20A1Q9P218 1284 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 R3HDM2Q9Y2K5 976 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 TRPV2Q9Y5S1 764 aa7.83□□□□□ -1.16
PDGFRA-206ENST00000508170 ENO4A6NNW6 628 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 C2CD2LO14523 706 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 HOXC8P31273 242 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ADD1P35611 737 aaKnown RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 SLC16A1P53985 500 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 RARSP54136 660 aaKnown RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PRRX1P54821 245 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 GPS2Q13227 327 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 THOC5Q13769 683 aaKnown RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 COTL1Q14019 142 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ARSIQ5FYB1 569 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 C3orf38Q5JPI3 329 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 LINC00696Q6ZRV3 163 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ERO1BQ86YB8 467 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PALM2Q8IXS6 379 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 XXYLT1Q8NBI6 393 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 GLB1L3Q8NCI6 653 aaPredicted RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 SETD6Q8TBK2 473 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 DDX17Q92841 729 aaKnown RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 NXPE3Q969Y0 559 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PTCHD1Q96NR3 888 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 GCNAQ96QF7 691 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 C19orf43Q9BQ61 176 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 CDK19Q9BWU1 502 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ZNF518BQ9C0D4 1074 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 TWSG1Q9GZX9 223 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 TOMM22Q9NS69 142 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 EMC3Q9P0I2 261 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 VPS18Q9P253 973 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 AGAP1Q9UPQ3 857 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 CHKBQ9Y259 395 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ATP6V1DQ9Y5K8 247 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 KDM6BO15054 1643 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ARHGEF37A1IGU5 675 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 HDAC3O15379 428 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 EVI2BP34910 448 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 MAP2K2P36507 400 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 AARSP49588 968 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 HUNKP57058 714 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ARPC4P59998 168 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 IDI1Q13907 227 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 GIT2Q14161 759 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PLEKHS1Q5SXH7 462 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 TMEM270Q6UE05 265 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 CHST3Q7LGC8 479 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 STK32CQ86UX6 486 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 SMARCE1Q969G3 411 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 RGMAQ96B86 450 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 GDAP1L1Q96MZ0 367 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 THUMPD2Q9BTF0 503 aaKnown RBP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 NTMT1Q9BV86 223 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PINK1Q9BXM7 581 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 NRDE2Q9H7Z3 1164 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 ZDHHC7Q9NXF8 308 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 PI4KBQ9UBF8 816 aa7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.82□□□□□ -1.16
PDGFRA-206ENST00000508170 KIAA0586Q9BVV6 1533 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 GRIN2AQ12879 1464 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 HSBP1L1C9JCN9 74 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 HRO43593 1189 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 ACTL6BO94805 426 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 IL1AP01583 271 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 UBL4AP11441 157 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 FDPSP14324 419 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 PTPN3P26045 913 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 EPHA8P29322 1005 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 GRK4P32298 578 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 PTGER3P43115 390 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 NPY4RP50391 375 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 CLCNKAP51800 687 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 RPS6KA3P51812 740 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 IRF3Q14653 427 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 RPS6KA2Q15349 733 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 MCMDC2Q4G0Z9 681 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 ETFRF1Q6IPR1 90 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 TIGD7Q6NT04 549 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 C3orf67Q6ZVT6 689 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 CCDC117Q8IWD4 279 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 FAM114A1Q8IWE2 563 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 ULK2Q8IYT8 1036 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 HIPK4Q8NE63 616 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 OR9A1PQ8NGU1 263 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 INPP5DQ92835 1189 aa7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 P2RX7Q99572 595 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 HNRNPABQ99729 332 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 CCDC86Q9H6F5 360 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 SMPD3Q9NY59 655 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-206ENST00000508170 DLGAP4Q9Y2H0 992 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms