RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TMC6Q7Z403 805 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 HOMEZQ8IX15 550 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 RDH13Q8NBN7 331 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 UCMAQ8WVF2 138 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 SPATA17Q96L03 361 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 JAKMIP1Q96N16 626 aaKnown RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 SLITRK1Q96PX8 696 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 LARP6Q9BRS8 491 aaKnown RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 NACA2Q9H009 215 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 ZNF768Q9H5H4 540 aaKnown RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 TMPRSS4Q9NRS4 437 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 EHD2Q9NZN4 543 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 CHORDC1Q9UHD1 332 aaPredicted RBP7.66□□□□□ -1.18
VCAN-207ENST00000507162 KIAA1024Q9UPX6 916 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 PLAAQ9Y263 795 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 PTPRJQ12913 1337 aa7.66□□□□□ -1.18
VCAN-207ENST00000507162 NF1P21359 2839 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 A1L4Q6 167 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 TRIM38O00635 465 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 OGTO15294 1046 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 SDC3O75056 442 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 AGFG2O95081 481 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 TNFSF15O95150 251 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 PRKCHP24723 683 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 COL8A1P27658 744 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 CD38P28907 300 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 LIG4P49917 911 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 ZNF132P52740 706 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 SMTNP53814 917 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 CYP4F2P78329 520 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 ARID5AQ03989 594 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 RAD51AP2Q09MP3 1159 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 STK3Q13188 491 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 ZNF234Q14588 700 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 ECM1Q16610 540 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 TSGA10IPQ3SY00 556 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 HS1BP3Q53T59 392 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 CDCP2Q5VXM1 449 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 KIAA0895LQ68EN5 471 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 CPLX2Q6PUV4 134 aaKnown RBP7.65□□□□□ -1.18
VCAN-207ENST00000507162 BLOC1S2Q6QNY1 142 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 ZPBP2Q6X784 338 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 OSTM1Q86WC4 334 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 FAM177A1Q8N128 213 aaPredicted RBP7.65□□□□□ -1.18
VCAN-207ENST00000507162 DAW1Q8N136 415 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 TMEM161BQ8NDZ6 487 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 OR2T3Q8NH03 318 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 ZNF564Q8TBZ8 553 aaPredicted RBP7.65□□□□□ -1.18
VCAN-207ENST00000507162 SORCS1Q8WY21 1168 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 FUBP3Q96I24 572 aaKnown RBP eCLIP7.65□□□□□ -1.18
VCAN-207ENST00000507162 PCNX1Q96RV3 2341 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 PKMYT1Q99640 499 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 MSTO1Q9BUK6 570 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 CCSER1Q9C0I3 900 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 TMEM60Q9H2L4 133 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 GEMIN8Q9NWZ8 242 aaKnown RBP7.65□□□□□ -1.18
VCAN-207ENST00000507162 L1RE1Q9UN81 338 aa7.65□□□□□ -1.18
VCAN-207ENST00000507162 MED13Q9UHV7 2174 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 BSNQ9UPA5 3926 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 A0A1W2PPC4 97 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 VPS37CA5D8V6 355 aaPredicted RBP7.64□□□□□ -1.19
VCAN-207ENST00000507162 F8VP50 259 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 TLR4O00206 839 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 WNT7AO00755 349 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 WNT9AO14904 365 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 NPC1O15118 1278 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 IGHV4-34P06331 123 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 ADRB2P07550 413 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 PDGFRBP09619 1106 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 THEGLP0DJG4 465 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 MAPTP10636 758 aaKnown RBP7.64□□□□□ -1.19
VCAN-207ENST00000507162 PCSK1P29120 753 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 MCM7P33993 719 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 LHX1P48742 406 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 ACOT2P49753 483 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 DUSP3P51452 185 aaPredicted RBP7.64□□□□□ -1.19
VCAN-207ENST00000507162 PSMC1P62191 440 aaKnown RBP7.64□□□□□ -1.19
VCAN-207ENST00000507162 ASIC1P78348 528 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 SKOR1P84550 965 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 CLCA4Q14CN2 919 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 TGIF1Q15583 401 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 GEN1Q17RS7 908 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 ISXQ2M1V0 245 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 HECTD3Q5T447 861 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 VSTM1Q6UX27 236 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 SERPINA13PQ6UXR4 307 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 ARL14Q8N4G2 192 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.64□□□□□ -1.19
VCAN-207ENST00000507162 SPATA20Q8TB22 786 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 FBXO32Q969P5 355 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 MYLPFQ96A32 169 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 ATXN7L3BQ96GX2 97 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 ORAI3Q9BRQ5 295 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 RUSC1Q9BVN2 902 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 TTLL2Q9BWV7 592 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 CIPCQ9C0C6 399 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 CCSER2Q9H7U1 834 aa7.64□□□□□ -1.19
VCAN-207ENST00000507162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.64□□□□□ -1.19
VCAN-207ENST00000507162 DDX19AQ9NUU7 478 aaKnown RBP7.64□□□□□ -1.19
VCAN-207ENST00000507162 ATXN7L1Q9ULK2 861 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms