RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MCM7P33993 719 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 ADRA1BP35368 520 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 PLA2G5P39877 138 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 MAPK9P45984 424 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 DEUP1Q05D60 604 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 L1TD1Q5T7N2 865 aaKnown RBP6.79□□□□□ -1.32
HERC4-213ENST00000506515 LCE4AQ5TA78 99 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 MSANTD2Q6P1R3 559 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 PIK3AP1Q6ZUJ8 805 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 USP51Q70EK9 711 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 MOGAT3Q86VF5 341 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 RP9Q8TA86 221 aaKnown RBP6.79□□□□□ -1.32
HERC4-213ENST00000506515 MCRS1Q96EZ8 462 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 TRAPPC9Q96Q05 1148 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 TAF1DQ9H5J8 278 aaPredicted RBP6.79□□□□□ -1.32
HERC4-213ENST00000506515 ELAC1Q9H777 363 aaKnown RBP6.79□□□□□ -1.32
HERC4-213ENST00000506515 SAYSD1Q9NPB0 183 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 DUSP22Q9NRW4 184 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 SERTAD4Q9NUC0 356 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 SAGE1Q9NXZ1 904 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 DLL3Q9NYJ7 618 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 KIF17Q9P2E2 1029 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 MGAT4CQ9UBM8 478 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 DAPP1Q9UN19 280 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 CUL7Q14999 1698 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 MAGI3Q5TCQ9 1506 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 KDM5BQ9UGL1 1544 aa6.79□□□□□ -1.32
HERC4-213ENST00000506515 KIF28PB7ZC32 967 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 QSOX1O00391 747 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 MATN3O15232 486 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 PRKAA2P54646 552 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 TAP1Q03518 808 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 SEMA3BQ13214 749 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 RPS6KA2Q15349 733 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 AASDHQ4L235 1098 aaPredicted RBP6.78□□□□□ -1.32
HERC4-213ENST00000506515 ANKRD45Q5TZF3 282 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 CCDC144NLQ6NUI1 221 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 RAB11FIP2Q7L804 512 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 KRT27Q7Z3Y8 459 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 SLC22A17Q8WUG5 538 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 NEU4Q8WWR8 484 aaPredicted RBP6.78□□□□□ -1.32
HERC4-213ENST00000506515 LARP4BQ92615 738 aaKnown RBP6.78□□□□□ -1.32
HERC4-213ENST00000506515 RSC1A1Q92681 617 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 RILPL2Q969X0 211 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 C3orf49Q96BT1 292 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 ZSCAN31Q96LW9 406 aaPredicted RBP6.78□□□□□ -1.32
HERC4-213ENST00000506515 VPS16Q9H269 839 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 RRN3Q9NYV6 651 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 AMFRQ9UKV5 643 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 PCDHB7Q9Y5E2 793 aa6.78□□□□□ -1.32
HERC4-213ENST00000506515 MAP3K4Q9Y6R4 1608 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 GRID2IPA4D2P6 1211 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 CCDC151A5D8V7 595 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 KRTAP9-7A8MTY7 169 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 H0YIZ8 118 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 ORC4O43929 436 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 PDE8BO95263 885 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 ELFN1P0C7U0 828 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 CST5P28325 142 aaPredicted RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 DGKQP52824 942 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 CUL4BQ13620 913 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 PUM1Q14671 1186 aaKnown RBP eCLIP6.77□□□□□ -1.33
HERC4-213ENST00000506515 NFRKBQ6P4R8 1299 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 PTCHD4Q6ZW05 846 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 ZNF627Q7L945 461 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 WDR53Q7Z5U6 358 aaPredicted RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 FTSJ3Q8IY81 847 aaKnown RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 NGDNQ8NEJ9 315 aaKnown RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 ABHD11Q8NFV4 315 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 CSGALNACT1Q8TDX6 532 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 AFG1LQ8WV93 481 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 HMGB4Q8WW32 186 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 LENG8Q96PV6 779 aaPredicted RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 DDX23Q9BUQ8 820 aaKnown RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 SEPSECSQ9HD40 501 aaKnown RBP6.77□□□□□ -1.33
HERC4-213ENST00000506515 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 CNTN6Q9UQ52 1028 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 PCDHB2Q9Y5E7 798 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 DISP3Q9P2K9 1392 aa6.77□□□□□ -1.33
HERC4-213ENST00000506515 POGZQ7Z3K3 1410 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A18PA6NE21 464 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A16PA6NEW6 464 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A9PA6NNJ1 464 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A5PA8MXJ8 464 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 B9A039 149 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 CTIFO43310 598 aaKnown RBP6.76□□□□□ -1.33
HERC4-213ENST00000506515 NPSP0C0P6 89 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM163BP0C2L3 166 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A15PP0C7V4 464 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 FAM90A14PP0C7W9 464 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 ALADP13716 330 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 ADRA1DP25100 572 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 EEFSECP57772 596 aaKnown RBP6.76□□□□□ -1.33
HERC4-213ENST00000506515 PSG6Q00889 435 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 ABHD18Q0P651 414 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 KCNJ12Q14500 433 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 TBC1D25Q3MII6 688 aa6.76□□□□□ -1.33
HERC4-213ENST00000506515 ADCK5Q3MIX3 580 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms