RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MYCT1Q8N699 235 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 MCRS1Q96EZ8 462 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 KATNAL1Q9BW62 490 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 R3HDMLQ9H3Y0 253 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 ASIC5Q9NY37 505 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 GRHPRQ9UBQ7 328 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 SERGEFQ9UGK8 458 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 PCDHB7Q9Y5E2 793 aa4.68□□□□□ -1.66
TOPBP1-204ENST00000505804 hCG_1642624A0A1W2PR95 340 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 TCRBV5S1A1TA0A578 114 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 SMIM22K7EJ46 135 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 M0QZQ0 153 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 ACKR2O00590 384 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CTIFO43310 598 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CER1O95813 267 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 MT-CO3P00414 261 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 TMIGD3P0DMS9 266 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 APEHP13798 732 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 AKT1P31749 480 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 GALNSP34059 522 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 ELLP55199 621 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 TXNL4AP83876 142 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CFHR3Q02985 330 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CCDC15Q0P6D6 951 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 PDCD2Q16342 344 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 TMEM119Q4V9L6 283 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 SERPINA13PQ6UXR4 307 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 NRSN1Q8IZ57 195 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CACNA2D3Q8IZS8 1091 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CLASRPQ8N2M8 674 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 SLC22A17Q8WUG5 538 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 OVCA2Q8WZ82 227 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 EID2BQ96D98 161 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 ZG16BQ96DA0 208 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 EDC3Q96F86 508 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 EIF3CQ99613 913 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CINPQ9BW66 212 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 SORBS1Q9BX66 1292 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 MAGEH1Q9H213 219 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 TP63Q9H3D4 680 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 AOX1Q06278 1338 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 ARID4BQ4LE39 1312 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 SPATA31A6Q5VVP1 1343 aa4.67□□□□□ -1.66
TOPBP1-204ENST00000505804 CCDC187A0A096LP49 1063 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 CLIC1O00299 241 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 FYB1O15117 783 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 MBPP02686 304 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 HALP42357 657 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 ANO1Q5XXA6 986 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 SULT6B1Q6IMI4 303 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 KRT27Q7Z3Y8 459 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 CCDC117Q8IWD4 279 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 LINC01465Q8N7H1 131 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 MAFAQ8NHW3 353 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 ADAMTS18Q8TE60 1221 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 MORC4Q8TE76 937 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 WDR60Q8WVS4 1066 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 CCDC17Q96LX7 622 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 HS6ST2Q96MM7 605 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 HERC5Q9UII4 1024 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 RIPOR2Q9Y4F9 1068 aa4.66□□□□□ -1.66
TOPBP1-204ENST00000505804 H7C1Q1 480 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 PROP1O75360 226 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 GCATO75600 419 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 RPP40O75818 363 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 C1RP00736 705 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 ITGA2BP08514 1039 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 ATF7P17544 494 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 MMP8P22894 467 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 IGHMBP2P38935 993 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 RAE1P78406 368 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 TFF2Q03403 129 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 MFSD13AQ14CX5 517 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 BTBD16Q32M84 506 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 FCRLBQ6BAA4 426 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 SUMO4Q6EEV6 95 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 LIN54Q6MZP7 749 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 ACSM6Q6P461 480 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 TMEM65Q6PI78 240 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 KLHL17Q6TDP4 642 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 RD3Q7Z3Z2 195 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 CHSY1Q86X52 802 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 ADGRG3Q86Y34 549 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 SCAMP5Q8TAC9 235 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 STT3BQ8TCJ2 826 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 CCT6BQ92526 530 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 LTV1Q96GA3 475 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 KAZALD1Q96I82 304 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 MLXIPQ9HAP2 919 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 RXFP3Q9NSD7 469 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 C11orf21Q9P2W6 132 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 FZD4Q9ULV1 537 aa4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 MORC2Q9Y6X9 1032 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-204ENST00000505804 KIF28PB7ZC32 967 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 POC1B-GALNT4F8VUJ3 575 aa4.64□□□□□ -1.67
TOPBP1-204ENST00000505804 H3BNC9 293 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms