RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 TIGD5Q53EQ6 642 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 INTS6LQ5JSJ4 861 aaKnown RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 GKAP1Q5VSY0 366 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 ZNF598Q86UK7 904 aaKnown RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 VPS52Q8N1B4 723 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 BRD8Q9H0E9 1235 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 GPBP1L1Q9HC44 474 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 RGS18Q9NS28 235 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 RNF186Q9NXI6 227 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 TMEM120BA0PK00 339 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 CASTOR2A6NHX0 329 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 CLDN5O00501 218 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 B3GAT3O94766 335 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 TMEM63AO94886 807 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 BRAFP15056 766 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 FDFT1P37268 417 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 SEC24CP53992 1094 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 SARNPP82979 210 aaKnown RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 KIAA0319Q5VV43 1072 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 ANKRD22Q5VYY1 191 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 CPLX4Q7Z7G2 160 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 SUSD3Q96L08 255 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 OLFM3Q96PB7 478 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 SMOQ99835 787 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 RAB6BQ9NRW1 208 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 KANSL3Q9P2N6 904 aa17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 RRP15Q9Y3B9 282 aaKnown RBP17.91■□□□□ 0.46
TRAPPC11-204ENST00000505676 TMEM189-UBE2V1I3L0A0 370 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 M0QYT0 321 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 PRPF4O43172 522 aaKnown RBP eCLIP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 MGEA5O60502 916 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 KIAA0754O94854 1291 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 RBL1P28749 1068 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 PRMT2P55345 433 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 TSPY1Q01534 308 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 PDK1Q15118 436 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 NCBP2-AS2Q69YL0 99 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 HEATR6Q6AI08 1181 aaKnown RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 FOXR1Q6PIV2 292 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 CCDC185Q8N715 623 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 C3orf58Q8NDZ4 430 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 MDM1Q8TC05 714 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 TFB1MQ8WVM0 346 aaKnown RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 ZNF317Q96PQ6 595 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 FTHL17Q9BXU8 183 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 ULBP1Q9BZM6 244 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 DMAP1Q9NPF5 467 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 ETNK2Q9NVF9 386 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 MYBPHLA2RUH7 354 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 RASA4BC9J798 803 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 PPP1R12AO14974 1030 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 NCAM2O15394 837 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 RASA4O43374 803 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 DGKIO75912 1065 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 BEST1O76090 585 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 LTFP02788 710 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 TFE3P19532 575 aaPredicted RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 STX2P32856 288 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 GLB1LQ6UWU2 654 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 VSTM1Q6UX27 236 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 TRABD2AQ86V40 505 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 SLC43A3Q8NBI5 491 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 FBXO36Q8NEA4 188 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 RNF139Q8WU17 664 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 DYDC1Q8WWB3 177 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 APBB2Q92870 758 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 ALKBH8Q96BT7 664 aaKnown RBP17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 CYTH2Q99418 400 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 DHRS4Q9BTZ2 278 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 PCDHB8Q9UN66 801 aa17.9■□□□□ 0.46
TRAPPC11-204ENST00000505676 ELNP15502 786 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 DRD4P21917 467 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 CYP2C18P33260 490 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 FASTKD3Q14CZ7 662 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 PAFAH1B3Q15102 231 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 TMED2Q15363 201 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 FNBP1LQ5T0N5 605 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 OTUD1Q5VV17 481 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 PM20D1Q6GTS8 502 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 C4orf50Q6ZRC1 276 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 C3orf62Q6ZUJ4 267 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 FAM131BQ86XD5 332 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 CACNA2D3Q8IZS8 1091 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 URGCPQ8TCY9 931 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 RSPH1Q8WYR4 309 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 XAB2Q9HCS7 855 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 EIF2B3Q9NR50 452 aaKnown RBP17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 RABGEF1Q9UJ41 708 aa17.89■□□□□ 0.45
TRAPPC11-204ENST00000505676 HHLA1C9JL84 531 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 TRDMT1O14717 391 aaKnown RBP17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 GPX6P59796 221 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 BBS9Q3SYG4 887 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 SLC24A5Q71RS6 500 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 ANKS4BQ8N8V4 417 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 ZMIZ2Q8NF64 920 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 RAET1EQ8TD07 263 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 MYLPFQ96A32 169 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 SMC6Q96SB8 1091 aa17.88■□□□□ 0.45
TRAPPC11-204ENST00000505676 ARHGEF4Q9NR80 690 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms