RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 SOX17Q9H6I2 414 aaPredicted RBP8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 SENP1Q9P0U3 644 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CNTNAP2Q9UHC6 1331 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 IQCA1LA6NCM1 817 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 C5orf60A6NFR6 353 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 MYO1GB0I1T2 1018 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CFAP99D6REC4 459 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 INPP4BO15327 924 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 TIPRLO75663 272 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 OSBPP22059 807 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 NT5C2P49902 561 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CAV1Q03135 178 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 WDR72Q3MJ13 1102 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 AGKQ53H12 422 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 SPDYAQ5MJ70 313 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 BNC2Q6ZN30 1099 aaPredicted RBP8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CMC1Q7Z7K0 106 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 NRG4Q8WWG1 115 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 TMEM143Q96AN5 459 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 DCUN1D1Q96GG9 259 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 HES6Q96HZ4 224 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 OMDQ99983 421 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CEP44Q9C0F1 390 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CCDC68Q9H2F9 335 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 SLX4Q8IY92 1834 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 ZBTB5O15062 677 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CLOCKO15516 846 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CAMTA2O94983 1202 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 GRK2P25098 689 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 TAS2R40P59535 323 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 ACTR2P61160 394 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CAPRIN1Q14444 709 aaKnown RBP8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 ZNF669Q96BR6 464 aaPredicted RBP8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 CENPTQ96BT3 561 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 RCN3Q96D15 328 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 SLC4A9Q96Q91 983 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 NPAS2Q99743 824 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 MSTO1Q9BUK6 570 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 STARD13Q9Y3M8 1113 aa8.05□□□□□ -1.12
ATP2C1-208ENST00000504948 ADGRA2Q96PE1 1338 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 RBAK-RBAKDNI3L0D1 243 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 UQCRBP14927 111 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 HLA-DPA1P20036 260 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 GLRA2P23416 452 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 EPHA7Q15375 998 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 RC3H1Q5TC82 1133 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 C12orf60Q5U649 245 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 NCCRP1Q6ZVX7 275 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 FBXW8Q8N3Y1 598 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 UBASH3BQ8TF42 649 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 TMIGD2Q96BF3 282 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 TUT1Q9H6E5 874 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 NOL11Q9H8H0 719 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 CNOT7Q9UIV1 285 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 BAG5Q9UL15 447 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 BLOC1S6Q9UL45 172 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 TMCO1Q9UM00 188 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 FZD1Q9UP38 647 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 COQ6Q9Y2Z9 468 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 ZNF536O15090 1300 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 A0A1W2PPW3 197 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 C2CD2LO14523 706 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 UGT1A9O60656 530 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 EN1Q05925 392 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 AMHR2Q16671 573 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 SHROOM1Q2M3G4 852 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 OR8H2Q8N162 312 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 OR6P1Q8NGX9 317 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 SHKBP1Q8TBC3 707 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PCDHB18PQ96TA0 734 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 GPATCH1Q9BRR8 931 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 UGT1A7Q9HAW7 530 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 UGT1A10Q9HAW8 530 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 UGT1A8Q9HAW9 530 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 RSL24D1Q9UHA3 163 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 GTF3C4Q9UKN8 822 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PRELID1Q9Y255 219 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 HBS1LQ9Y450 684 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 M0QYV0 167 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PDLIM1O00151 329 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 DNALI1O14645 258 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PHGDHO43175 533 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 ECHS1P30084 290 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 GARSP41250 739 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 GRIA3P42263 894 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 LBRQ14739 615 aaKnown RBP8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 TMEM63BQ5T3F8 832 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 ANKRD22Q5VYY1 191 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 LRRC57Q8N9N7 239 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 TRIM8Q9BZR9 551 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PCDHAC1Q9H158 963 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 CHST12Q9NRB3 414 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 PKD2L2Q9NZM6 624 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 SNX8Q9Y5X2 465 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 LOC100506127A0A0U1RQW1 187 aa8.04□□□□□ -1.12
ATP2C1-208ENST00000504948 EML1O00423 815 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms