RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
DDX41-204ENST00000504807 MMP17Q9ULZ9 603 aa13.84□□□□□ -0.19
DDX41-204ENST00000504807 COQ4Q9Y3A0 265 aa13.84□□□□□ -0.19
DDX41-204ENST00000504807 CETN3O15182 167 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 HOXC11O43248 304 aaPredicted RBP13.83□□□□□ -0.2
DDX41-204ENST00000504807 RARGP13631 454 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 FAM193AP78312 1265 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 LRMPQ12912 555 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 CRY1Q16526 586 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 ANO7Q6IWH7 933 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 Q6ZNB5 142 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 TOGARAM2Q6ZUX3 1019 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 HTR3DQ70Z44 454 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 DDX42Q86XP3 938 aaKnown RBP eCLIP13.83□□□□□ -0.2
DDX41-204ENST00000504807 RLN3Q8WXF3 142 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 PIGKQ92643 395 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 HEXIM2Q96MH2 286 aaKnown RBP13.83□□□□□ -0.2
DDX41-204ENST00000504807 ACOX2Q99424 681 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 FBXO44Q9H4M3 255 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 CD248Q9HCU0 757 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 TLR8Q9NR97 1041 aaKnown RBP13.83□□□□□ -0.2
DDX41-204ENST00000504807 SH3BP1Q9Y3L3 701 aa13.83□□□□□ -0.2
DDX41-204ENST00000504807 ASCC3Q8N3C0 2202 aaKnown RBP13.83□□□□□ -0.2
DDX41-204ENST00000504807 PPP1R3GB7ZBB8 358 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 PRRT4C9JH25 899 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 RNF225M0QZC1 329 aaPredicted RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 SLC9A3R1O14745 358 aaPredicted RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 SLC16A3O15427 465 aaKnown RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 ADH1CP00326 375 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 EPB41P11171 864 aaKnown RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 EIF2DP41214 584 aaKnown RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 DGKEP52429 567 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 RAB41Q5JT25 222 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 TTI2Q6NXR4 508 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 TPGS1Q6ZTW0 290 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 RAB44Q7Z6P3 723 aaPredicted RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 PIP4P1Q86T03 277 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 PIGZQ86VD9 579 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 TSTD1Q8NFU3 115 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 OLIG1Q8TAK6 271 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 LMO3Q8TAP4 145 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 TFAP2BQ92481 460 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 BHMTQ93088 406 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 SMARCE1Q969G3 411 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 ACDQ96AP0 544 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 TMEM176AQ96HP8 235 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 PNPLA8Q9NP80 782 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 CD93Q9NPY3 652 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 TBC1D14Q9P2M4 693 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 MBD1Q9UIS9 605 aaPredicted RBP13.82□□□□□ -0.2
DDX41-204ENST00000504807 NAGPAQ9UK23 515 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 MYH10P35580 1976 aa13.82□□□□□ -0.2
DDX41-204ENST00000504807 STC2O76061 302 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 CISD3P0C7P0 127 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 ATP5C1P36542 298 aaKnown RBP13.81□□□□□ -0.2
DDX41-204ENST00000504807 GRIA2P42262 883 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 WASP42768 502 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 DHPSP49366 369 aaPredicted RBP13.81□□□□□ -0.2
DDX41-204ENST00000504807 GAD2Q05329 585 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 LMAN2Q12907 356 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 CUL2Q13617 745 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 GOLGA7BQ2TAP0 167 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 ANO4Q32M45 955 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 TRIM61Q5EBN2 209 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 TCERG1LQ5VWI1 586 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 EGFLAMQ63HQ2 1017 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 PMS2CLQ68D20 193 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 ARHGAP17Q68EM7 881 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 ZNF605Q86T29 641 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 SLC39A7Q92504 469 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
DDX41-204ENST00000504807 TIGD1Q96MW7 591 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 MED15Q96RN5 788 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 NACA2Q9H009 215 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 SCUBE2Q9NQ36 999 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 PLK2Q9NYY3 685 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 CLEC4EQ9ULY5 219 aa13.81□□□□□ -0.2
DDX41-204ENST00000504807 NEDD8-MDP1E9PL57 170 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 BIN1O00499 593 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 CACNG3O60359 315 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 APODP05090 189 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 HMBSP08397 361 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 NUCB2P80303 420 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 MRPS21P82921 87 aaKnown RBP13.8□□□□□ -0.2
DDX41-204ENST00000504807 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
DDX41-204ENST00000504807 PDE4CQ08493 712 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 MORC3Q14149 939 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 ZNF423Q2M1K9 1284 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 PKDCCQ504Y2 493 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 C10orf120Q5SQS8 335 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 ARHGEF19Q8IW93 802 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 TERB1Q8NA31 727 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 UBA3Q8TBC4 463 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 OTUB2Q96DC9 234 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 UBL7Q96S82 380 aaPredicted RBP13.8□□□□□ -0.2
DDX41-204ENST00000504807 SLC6A17Q9H1V8 727 aa13.8□□□□□ -0.2
DDX41-204ENST00000504807 MARK1Q9P0L2 795 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms