RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	PNPLA8	Q9NP80	782 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	VPS45	Q9NRW7	570 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	HERC5	Q9UII4	1024 aa	Known RBP	18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	RIMS3	Q9UJD0	308 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CDH7	Q9ULB5	785 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TBX20	Q9UMR3	447 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	IVNS1ABP	Q9Y6Y0	642 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SIPA1L1	O43166	1804 aa		18.44	■□□□□ 0.54
POLR2J3-209	ENST00000504157	GOLGA8T	H3BQL2	631 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ZNF701	M0R085	212 aa	Predicted RBP	18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SLC16A4	O15374	487 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CDKL1	Q00532	357 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TATDN1	Q6P1N9	297 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	HHIPL2	Q6UWX4	724 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CENPS	Q8N2Z9	138 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CHPT1	Q8WUD6	406 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CYP4F11	Q9HBI6	524 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	POLL	Q9UGP5	575 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SYNPO2	Q9UMS6	1093 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	GIT1	Q9Y2X7	761 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SPTLC1	O15269	473 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CDH3	P22223	829 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TUBA4A	P68366	448 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CRY2	Q49AN0	593 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	MIER3	Q7Z3K6	550 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	DDHD1	Q8NEL9	900 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PLEKHA8	Q96JA3	519 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	GINM1	Q9NU53	330 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SCHIP1	Q9P0W5	487 aa	Predicted RBP	18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PRR12	Q9ULL5	1215 aa		18.43	■□□□□ 0.54
POLR2J3-209	ENST00000504157		A0A1B0GTW7	788 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TCRBV9S1A1T	A0A576	114 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	XPOT	O43592	962 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TCF4	P15884	667 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ACO1	P21399	889 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SLC5A3	P53794	718 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TTC39B	Q5VTQ0	682 aa	Predicted RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ITPRIPL1	Q6GPH6	555 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SNRNP48	Q6IEG0	339 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ZFP1	Q6P2D0	407 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	NUDCD3	Q8IVD9	361 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TMEM161B	Q8NDZ6	487 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	RPGR	Q92834	1020 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CMTM5	Q96DZ9	223 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	C20orf27	Q9GZN8	174 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PAIP1	Q9H074	479 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SIN3B	O75182	1162 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TMEM63A	O94886	807 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CFB	P00751	764 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	C8B	P07358	591 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PSMC3	P17980	439 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	RPL22	P35268	128 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PEX3	P56589	373 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CLDN10	P78369	228 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ZNF252P-AS1	Q0IIN9	211 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	INA	Q16352	499 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SHROOM1	Q2M3G4	852 aa	Predicted RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	BBS9	Q3SYG4	887 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CHERP	Q8IWX8	916 aa	Known RBP	18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	NIPA2	Q8N8Q9	360 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	HSPH1	Q92598	858 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PI4K2A	Q9BTU6	479 aa		18.42	■□□□□ 0.54
POLR2J3-209	ENST00000504157		K7EPI3	171 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	H6PD	O95479	791 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PDK1	Q15118	436 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ANGEL2	Q5VTE6	544 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	APOBEC3H	Q6NTF7	200 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	POLN	Q7Z5Q5	900 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	GPR180	Q86V85	440 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SLC26A11	Q86WA9	606 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CERS5	Q8N5B7	392 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	STARD8	Q92502	1023 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TRNAU1AP	Q9NX07	287 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CNTN6	Q9UQ52	1028 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	MMP8	P22894	467 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	C21orf59	P57076	290 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	RPS3A	P61247	264 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	DCAF6	Q58WW2	860 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	WDR44	Q5JSH3	913 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	ZFYVE27	Q5T4F4	411 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	FASTKD5	Q7L8L6	764 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TFB1M	Q8WVM0	346 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	NLRP7	Q8WX94	980 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	EME1	Q96AY2	570 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	MXRA8	Q9BRK3	442 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	COA1	Q9GZY4	146 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	THAP1	Q9NVV9	213 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	XPO7	Q9UIA9	1087 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CNOT11	Q9UKZ1	510 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	APOBEC2	Q9Y235	224 aa	Known RBP	18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	RNF11	Q9Y3C5	154 aa		18.41	■□□□□ 0.54
POLR2J3-209	ENST00000504157	LTBP1	Q14766	1721 aa		18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	TCRBV5S1A1T	A0A578	114 aa		18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	C3orf70	A6NLC5	250 aa	Predicted RBP	18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	CFH	P08603	1231 aa		18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	SLURP2	P0DP57	97 aa		18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	EIF2B2	P49770	351 aa	Known RBP	18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	NEK2	P51955	445 aa		18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	PSMC5	P62195	406 aa		18.4	■□□□□ 0.54
POLR2J3-209	ENST00000504157	MRPS5	P82675	430 aa	Known RBP	18.4	■□□□□ 0.54

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