RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TMEM209Q96SK2 561 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 SLC9A7Q96T83 725 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 FTHL17Q9BXU8 183 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 PIGVQ9NUD9 493 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 PCDHB8Q9UN66 801 aa22.16■■□□□ 1.14
UBE2D3-216ENST00000503742 SRRM3A6NNA2 597 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 KCNN4O15554 427 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 LTFP02788 710 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 GOT1P17174 413 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 BDNFP23560 247 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 DEUP1Q05D60 604 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 NCBP2-AS2Q69YL0 99 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 PM20D1Q6GTS8 502 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 LRRC8DQ7L1W4 858 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 COLGALT2Q8IYK4 626 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 THEM5Q8N1Q8 247 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 SCML4Q8N228 414 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 PGAP3Q96FM1 320 aaPredicted RBP22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 PAK5Q9P286 719 aa22.15■■□□□ 1.14
UBE2D3-216ENST00000503742 A0A087WUV0 522 aaPredicted RBP22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 KBTBD13C9JR72 458 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 GOLGA8MH3BSY2 632 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 TMEM189-UBE2V1I3L0A0 370 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 SELPP16109 830 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 AMPD1P23109 780 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 ARL4AP40617 200 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 ARL4CP56559 192 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 PDIA2Q13087 525 aaKnown RBP22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 KCNJ11Q14654 390 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 MAPRE1Q15691 268 aaKnown RBP22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 FNBP1LQ5T0N5 605 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 ZBED8Q8IZ13 594 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 IRGQQ8WZA9 623 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 WDR6Q9NNW5 1121 aaKnown RBP22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 PNPLA8Q9NP80 782 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 EURLQ9NYK6 297 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 LGALS13Q9UHV8 139 aa22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 ZMYND8Q9ULU4 1186 aaPredicted RBP22.14■■□□□ 1.14
UBE2D3-216ENST00000503742 PATJQ8NI35 1801 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 CAPN9O14815 690 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 MAP3K6O95382 1288 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 IVLP07476 585 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 AIF1P55008 147 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 CTU1Q7Z7A3 348 aaKnown RBP22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 CDKL3Q8IVW4 592 aaPredicted RBP22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 SLC7A14Q8TBB6 771 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 URGCPQ8TCY9 931 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 NTAN1Q96AB6 310 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 SEZ6LQ9BYH1 1024 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.14■■□□□ 1.138e-9■■□□□ 13.6
UBE2D3-216ENST00000503742 DMAP1Q9NPF5 467 aaPredicted RBP22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 TMPRSS4Q9NRS4 437 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 ETNK2Q9NVF9 386 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 TBC1D13Q9NVG8 400 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 RRN3Q9NYV6 651 aa22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.14■■□□□ 1.13
UBE2D3-216ENST00000503742 BASP1P80723 227 aaKnown RBP22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 TSPY1Q01534 308 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 CBLBQ13191 982 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 NME3Q13232 169 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 GPNMBQ14956 572 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 MSS51Q4VC12 460 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 SLC45A4Q5BKX6 768 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 EXOC3L1Q86VI1 746 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 TAB3Q8N5C8 712 aaPredicted RBP22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 CCDC77Q9BR77 488 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 EPN3Q9H201 632 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 ARHGEF4Q9NR80 690 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 DTLQ9NZJ0 730 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 KANSL3Q9P2N6 904 aa22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 XPO7Q9UIA9 1087 aaKnown RBP22.13■■□□□ 1.13
UBE2D3-216ENST00000503742 SYNJ2BP-COX16A0A087WUM0 186 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 CHADO15335 359 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 COL6A1P12109 1028 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 YWHAHQ04917 246 aaPredicted RBP22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 SCAPQ12770 1279 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 FAM126BQ8IXS8 530 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 CCDC13Q8IYE1 715 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 RNF139Q8WU17 664 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 OLFM3Q96PB7 478 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 TMEM161AQ9NX61 479 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 COX16Q9P0S2 106 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 MFHAS1Q9Y4C4 1052 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 ZNF638Q14966 1978 aaKnown RBP22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 NBNO60934 754 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 CDH16O75309 829 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 BANF1O75531 89 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 NCAM1P13591 858 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 ADRA1BP35368 520 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 HNRNPH2P55795 449 aaKnown RBP22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 HP1BP3Q5SSJ5 553 aaPredicted RBP22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 KCNT2Q6UVM3 1135 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 BCAS4Q8TDM0 211 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 CENPTQ96BT3 561 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 QKIQ96PU8 341 aaKnown RBP eCLIP22.12■■□□□ 1.135e-10■■■□□ 18.8
UBE2D3-216ENST00000503742 WDR83Q9BRX9 315 aaKnown RBP22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 CTNNAL1Q9UBT7 734 aa22.12■■□□□ 1.13
UBE2D3-216ENST00000503742 E7EVH7 732 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 H3BRJ5 948 aa22.11■■□□□ 1.13
UBE2D3-216ENST00000503742 DGKIO75912 1065 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms