RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 PLA2G2FQ9BZM2 168 aa13.99□□□□□ -0.17
PGGT1B-204ENST00000503638 NHEJ1Q9H9Q4 299 aaPredicted RBP13.99□□□□□ -0.17
PGGT1B-204ENST00000503638 TRPV4Q9HBA0 871 aa13.99□□□□□ -0.17
PGGT1B-204ENST00000503638 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
PGGT1B-204ENST00000503638 IMPACTQ9P2X3 320 aa13.99□□□□□ -0.17
PGGT1B-204ENST00000503638 MYO1AQ9UBC5 1043 aa13.99□□□□□ -0.17
PGGT1B-204ENST00000503638 A0A087X0T9 212 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 RTN2O75298 545 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 DAB1O75553 588 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 OLFM2O95897 454 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 GLI1P08151 1106 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 FAM228BP0C875 321 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 DESP17661 470 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 GABRB2P47870 512 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 NME3Q13232 169 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 ZNF268Q14587 947 aaPredicted RBP13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 DCUN1D2Q6PH85 259 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 KLHDC10Q6PID8 442 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 WDR59Q6PJI9 974 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 MON1BQ7L1V2 547 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 SLC26A9Q7LBE3 791 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 MFSD6LQ8IWD5 586 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 MCOLN2Q8IZK6 566 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 DQX1Q8TE96 717 aaKnown RBP13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 ZFYVE19Q96K21 471 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 CHP1Q99653 195 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 SPTLC3Q9NUV7 552 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 ASNSD1Q9NWL6 643 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 DUS2Q9NX74 493 aaKnown RBP13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 FBXL21Q9UKT6 434 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 STAP1Q9ULZ2 295 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 WNT6Q9Y6F9 365 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 DOCK8Q8NF50 2099 aa13.98□□□□□ -0.17
PGGT1B-204ENST00000503638 RIOK3O14730 519 aaKnown RBP13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 NARSO43776 548 aaKnown RBP13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 IPO7O95373 1038 aaKnown RBP13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 GJB6O95452 261 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 KRT3P12035 628 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 RRM1P23921 792 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 WEE1P30291 646 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 GBP1P32455 592 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 SULT1E1P49888 294 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 COG7P83436 770 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 SYPL2Q5VXT5 272 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 ALKBH5Q6P6C2 394 aaKnown RBP13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 TAC4Q86UU9 113 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 EMC1Q8N766 993 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 TTC8Q8TAM2 541 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 SERPINB11Q96P15 392 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 PANX2Q96RD6 677 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 KLF16Q9BXK1 252 aaPredicted RBP13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 SMOC2Q9H3U7 446 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 DDIT4Q9NX09 232 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 OBP2AQ9NY56 170 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 CNOT8Q9UFF9 292 aaKnown RBP13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 ZDBF2Q9HCK1 2354 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 USP34Q70CQ2 3546 aa13.97□□□□□ -0.17
PGGT1B-204ENST00000503638 NUP210Q8TEM1 1887 aaPredicted RBP13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SSU72P8A0A1W2PR75 194 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 TMEM221A6NGB7 291 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 M0R296 226 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 MOCS2O96007 188 aaPredicted RBP13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 MYBL1P10243 752 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SRFP11831 508 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 GZMAP12544 262 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 CORO1AP31146 461 aaKnown RBP13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SDC4P31431 198 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SCNN1AP37088 669 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 MATKP42679 507 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 HARS2P49590 506 aaKnown RBP13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 TBX4P57082 545 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 GSDMDP57764 484 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 GPC5P78333 572 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 USP4Q13107 963 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 ARID5BQ14865 1188 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SPA17Q15506 151 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 ZNF77Q15935 545 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SLC18A3Q16572 532 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 ARHGAP29Q52LW3 1261 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SND1Q7KZF4 910 aaKnown RBP eCLIP13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 BMP8AQ7Z5Y6 402 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 C3orf20Q8ND61 904 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 MCEEQ96PE7 176 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 SLC2A13Q96QE2 648 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 PARVAQ9NVD7 372 aa13.96□□□□□ -0.17
PGGT1B-204ENST00000503638 DENND4CQ5VZ89 1909 aa13.96□□□□□ -0.18
PGGT1B-204ENST00000503638 ANAPC1Q9H1A4 1944 aa13.96□□□□□ -0.18
PGGT1B-204ENST00000503638 M0QYT0 321 aa13.95□□□□□ -0.18
PGGT1B-204ENST00000503638 SLC9A3R1O14745 358 aaPredicted RBP13.95□□□□□ -0.18
PGGT1B-204ENST00000503638 STC2O76061 302 aa13.95□□□□□ -0.18
PGGT1B-204ENST00000503638 TRUB2O95900 331 aaKnown RBP13.95□□□□□ -0.18
PGGT1B-204ENST00000503638 APOEP02649 317 aa13.95□□□□□ -0.18
PGGT1B-204ENST00000503638 FYNP06241 537 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms