RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SLC26A9Q7LBE3 791 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 CATSPER4Q7RTX7 472 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 UNC93AQ86WB7 457 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 ZDHHC17Q8IUH5 632 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 VPS52Q8N1B4 723 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 LRRC52Q8N7C0 313 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 MCUQ8NE86 351 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 CENPIQ92674 756 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 SKA1Q96BD8 255 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 SIGLEC10Q96LC7 697 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 QKIQ96PU8 341 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 CSPG4P5Q96PW8 444 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 MYCBPQ99417 103 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 OSMRQ99650 979 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 MIPEPQ99797 713 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 MECRQ9BV79 373 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 APOL6Q9BWW8 343 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 TMEM120AQ9BXJ8 343 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 FBXO6Q9NRD1 293 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 NKX1-2Q9UD57 310 aaPredicted RBP10.21□□□□□ -0.77
CLIP1-204ENST00000501271 LNPEPQ9UIQ6 1025 aa10.21□□□□□ -0.77
CLIP1-204ENST00000501271 TRIP12Q14669 1992 aaPredicted RBP10.21□□□□□ -0.78
CLIP1-204ENST00000501271 A6NJR5 290 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 PEX11AO75192 247 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 GPR32O75388 356 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 GCATO75600 419 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 KRT37O76014 449 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 SNRPAP09012 282 aaKnown RBP10.21□□□□□ -0.78
CLIP1-204ENST00000501271 NEFHP12036 1026 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 DESP17661 470 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 AKAP5P24588 427 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 PTPN4P29074 926 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 SERPINB3P29508 390 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 CCNFP41002 786 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 ARFIP2P53365 341 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 CCNA1P78396 465 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 BST2Q10589 180 aaKnown RBP10.21□□□□□ -0.78
CLIP1-204ENST00000501271 CES4AQ5XG92 561 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 NCBP2-AS2Q69YL0 99 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 ALKAL1Q6UXT8 129 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 PYROXD2Q8N2H3 581 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 BEST2Q8NFU1 509 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 OR6J1Q8NGC5 347 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 IQCGQ9H095 443 aaKnown RBP10.21□□□□□ -0.78
CLIP1-204ENST00000501271 SAR1AQ9NR31 198 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 ARL8BQ9NVJ2 186 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 MAD1L1Q9Y6D9 718 aa10.21□□□□□ -0.78
CLIP1-204ENST00000501271 DNAH12Q6ZR08 3092 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 HMX2A2RU54 273 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 F5H423 210 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-204ENST00000501271 TRDMT1O14717 391 aaKnown RBP10.2□□□□□ -0.78
CLIP1-204ENST00000501271 SPTLC1O15269 473 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 HAUS5O94927 633 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 TGDSO95455 350 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 HOXD8P13378 290 aaPredicted RBP10.2□□□□□ -0.78
CLIP1-204ENST00000501271 VAV1P15498 845 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 GOT1P17174 413 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 TPSB2P20231 275 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 RASSF2P50749 326 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 BCAT1P54687 386 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 CDK16Q00536 496 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 TPSAB1Q15661 275 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 DUSP28Q4G0W2 176 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 RPAINQ86UA6 219 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 ANKRD52Q8NB46 1076 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 GSDMBQ8TAX9 411 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 LRRC39Q96DD0 335 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 PTCD3Q96EY7 689 aaKnown RBP10.2□□□□□ -0.78
CLIP1-204ENST00000501271 ZNF570Q96NI8 536 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 EBNA1BP2Q99848 306 aaKnown RBP10.2□□□□□ -0.78
CLIP1-204ENST00000501271 CXorf56Q9H5V9 222 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 TLE6Q9H808 572 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 DTLQ9NZJ0 730 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 PLLPQ9Y342 182 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 USP3Q9Y6I4 520 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 CENPFP49454 3210 aa10.2□□□□□ -0.78
CLIP1-204ENST00000501271 FAM159BA6NKW6 160 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 PDHXO00330 501 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 KLF11O14901 512 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 IL1BP01584 269 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 AMPD1P23109 780 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 RPL34P49207 117 aaKnown RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 SNX16P57768 344 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 FBXO47Q5MNV8 452 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 LDLRAD1Q5T700 205 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 HEATR6Q6AI08 1181 aaKnown RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 NOTUMQ6P988 496 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 DENND5BQ6ZUT9 1274 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 TTC7BQ86TV6 843 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 NETO2Q8NC67 525 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 ARMC2Q8NEN0 867 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 SLC2A14Q8TDB8 520 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 NDRG1Q92597 394 aaKnown RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 GCOM2Q9BZD3 368 aaPredicted RBP10.19□□□□□ -0.78
CLIP1-204ENST00000501271 SLC13A1Q9BZW2 595 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 GOLGA2P5Q9HBQ8 144 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 PCMTD2Q9NV79 361 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 KLK14Q9P0G3 267 aa10.19□□□□□ -0.78
CLIP1-204ENST00000501271 GTF2IRD1Q9UHL9 959 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms