RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 HSP90AA4PQ58FG1 418 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 FMNL3Q8IVF7 1028 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 TERB1Q8NA31 727 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 MIS12Q9H081 205 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 ARRDC1-AS1Q9H2J1 176 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 ACP6Q9NPH0 428 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 LMBRD1Q9NUN5 540 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 MARK1Q9P0L2 795 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 EBF1Q9UH73 591 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 STRIP2Q9ULQ0 834 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 GVINP1Q7Z2Y8 2422 aa16.87■□□□□ 0.29
NR1H3-227ENST00000498548 PRRT4C9JH25 899 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 CACNG3O60359 315 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 CISD3P0C7P0 127 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 DPCR1Q3MIW9 517 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 EOGTQ5NDL2 527 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 EGFLAMQ63HQ2 1017 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 DENND1BQ6P3S1 775 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 ABCA7Q8IZY2 2146 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 GPR161Q8N6U8 529 aaKnown RBP16.86■□□□□ 0.29
NR1H3-227ENST00000498548 ZNF513Q8N8E2 541 aaPredicted RBP16.86■□□□□ 0.29
NR1H3-227ENST00000498548 MDGA1Q8NFP4 955 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 RNF139Q8WU17 664 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 ACOX2Q99424 681 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 DCLK3Q9C098 648 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 NUP62CLQ9H1M0 184 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 CNGB3Q9NQW8 809 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 SEMA4GQ9NTN9 838 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 ZNF510Q9Y2H8 683 aa16.86■□□□□ 0.29
NR1H3-227ENST00000498548 MSI1O43347 362 aaKnown RBP16.85■□□□□ 0.29
NR1H3-227ENST00000498548 TSPAN3O60637 253 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 LETM1O95202 739 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-227ENST00000498548 USP8P40818 1118 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 DGKGP49619 791 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 PLK5Q496M5 336 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 FYB2Q5VWT5 728 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 RLN3Q8WXF3 142 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 DUSP15Q9H1R2 295 aaPredicted RBP16.85■□□□□ 0.29
NR1H3-227ENST00000498548 SMOC1Q9H4F8 434 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 ABCC13Q9NSE7 274 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 CLEC4EQ9ULY5 219 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 CNTN6Q9UQ52 1028 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 THADAQ6YHU6 1953 aa16.85■□□□□ 0.29
NR1H3-227ENST00000498548 TCRBV21S2A2A0A5A6 115 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 BCKDHBP21953 392 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 GBP1P32455 592 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 MFAP3P55082 362 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 STILQ15468 1287 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 TRIP4Q15650 581 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-227ENST00000498548 PREPLQ4J6C6 727 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-227ENST00000498548 TRIM65Q6PJ69 517 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 GBP6Q6ZN66 633 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 NUDT18Q6ZVK8 323 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 RASSF3Q86WH2 238 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 PGBD3Q8N328 593 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 FRMD1Q8N878 549 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 HMGB4Q8WW32 186 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 POLMQ9NP87 494 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-227ENST00000498548 ST7Q9NRC1 585 aa16.84■□□□□ 0.29
NR1H3-227ENST00000498548 OLA1Q9NTK5 396 aaKnown RBP16.84■□□□□ 0.29
NR1H3-227ENST00000498548 AJAP1Q9UKB5 411 aaPredicted RBP16.84■□□□□ 0.29
NR1H3-227ENST00000498548 BECN2A8MW95 431 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 THAP12O43422 761 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 GDF9O60383 454 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 ALDH1A2O94788 518 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 EPN2O95208 641 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 PON1P27169 355 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 CHKAP35790 457 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 GPD2P43304 727 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 SF3A2Q15428 464 aaKnown RBP16.83■□□□□ 0.28
NR1H3-227ENST00000498548 EXOC3L4Q17RC7 722 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 HSF5Q4G112 596 aaPredicted RBP16.83■□□□□ 0.28
NR1H3-227ENST00000498548 USP39Q53GS9 565 aaKnown RBP16.83■□□□□ 0.28
NR1H3-227ENST00000498548 PRR23CQ6ZRP0 262 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 SCUBE3Q8IX30 993 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 SCML4Q8N228 414 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 ZNF606Q8WXB4 792 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 PLD4Q96BZ4 506 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 ZC3H10Q96K80 434 aaKnown RBP16.83■□□□□ 0.28
NR1H3-227ENST00000498548 HSFY1Q96LI6 401 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 THAP9Q9H5L6 903 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 BCCIPQ9P287 314 aaKnown RBP eCLIP16.83■□□□□ 0.28
NR1H3-227ENST00000498548 CYTH4Q9UIA0 394 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 FBXO10Q9UK96 956 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 STARD13Q9Y3M8 1113 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 FRYLO94915 3013 aa16.83■□□□□ 0.28
NR1H3-227ENST00000498548 WASH3PC4AMC7 463 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 PENKP01210 267 aaPredicted RBP16.82■□□□□ 0.28
NR1H3-227ENST00000498548 LTFP02788 710 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 HOXB2P14652 356 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 GNA15P30679 374 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 NTSR1P30989 418 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 HARS2P49590 506 aaKnown RBP16.82■□□□□ 0.28
NR1H3-227ENST00000498548 CSRP2Q16527 193 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 GEN1Q17RS7 908 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 DDI1Q8WTU0 396 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 IRGQQ8WZA9 623 aa16.82■□□□□ 0.28
NR1H3-227ENST00000498548 SIX2Q9NPC8 291 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms