RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 ARHGAP17Q68EM7 881 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 SLC36A4Q6YBV0 504 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 Q6ZNB5 142 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 SCD5Q86SK9 330 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 TMEFF1Q8IYR6 380 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 CHPFQ8IZ52 775 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 TATDN2Q93075 761 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 SMARCE1Q969G3 411 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 TMEM9BQ9NQ34 198 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 STRIP2Q9ULQ0 834 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 AP5Z1O43299 807 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 ZNF217O75362 1048 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 KCNK5O95279 499 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 HMBSP08397 361 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 GABRG2P18507 467 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 WASP42768 502 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 NUCB2P80303 420 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 EFEMP1Q12805 493 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 LMAN2Q12907 356 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 N4BP2L1Q5TBK1 243 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 LYSMD4Q5XG99 296 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 EGFLAMQ63HQ2 1017 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 ANKRD40Q6AI12 368 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 ARMCX6Q7L4S7 300 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 PIGZQ86VD9 579 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 SYT12Q8IV01 421 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 BHMTQ93088 406 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 ARID3AQ99856 593 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 NUSAP1Q9BXS6 441 aaKnown RBP12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 MARCH2Q9P0N8 246 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 HESX1Q9UBX0 185 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 EVLQ9UI08 416 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 MBD1Q9UIS9 605 aaPredicted RBP12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 ANGPTL2Q9UKU9 493 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 GTF3C3Q9Y5Q9 886 aa12.34□□□□□ -0.43
NUDCD3-211ENST00000497978 PATE3B3GLJ2 98 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 GFRA2O00451 464 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 PSMA7O14818 248 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 ZBED1O96006 694 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CYBBP04839 570 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CISD3P0C7P0 127 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 TBXAS1P24557 533 aaPredicted RBP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CORO1AP31146 461 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 TKTL1P51854 596 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 BCAT1P54687 386 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 YWHAGP61981 247 aaKnown RBP eCLIP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 IRX4P78413 519 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 RPL6Q02878 288 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CUL2Q13617 745 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 E2F5Q15329 346 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CBWD6Q4V339 395 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 TRIM61Q5EBN2 209 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 RAB41Q5JT25 222 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CBWD3Q5JTY5 395 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CBWD5Q5RIA9 395 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 PSAPL1Q6NUJ1 521 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 TOGARAM2Q6ZUX3 1019 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 FRMD1Q8N878 549 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 UCMAQ8WVF2 138 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 TIGD1Q96MW7 591 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 GABRG3Q99928 467 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 LRRC4Q9HBW1 653 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 METTL14Q9HCE5 456 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 OLA1Q9NTK5 396 aaKnown RBP12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 PLK2Q9NYY3 685 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 CALCOCO1Q9P1Z2 691 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 COQ4Q9Y3A0 265 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 PLXND1Q9Y4D7 1925 aa12.33□□□□□ -0.44
NUDCD3-211ENST00000497978 A0A1W2PQF6 199 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 SLC12A8A0AV02 714 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 PRRT4C9JH25 899 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 NPC1O15118 1278 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 KLKB1P03952 638 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 CD19P15391 556 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 HOXD12P35452 270 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 PPP1R2P41236 205 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 PTGER3P43115 390 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 BST2Q10589 180 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 STARD3Q14849 445 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 RABEPKQ7Z6M1 372 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 DENND1CQ8IV53 801 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 ZC3H3Q8IXZ2 948 aaKnown RBP12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 ENGASEQ8NFI3 743 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 CEP76Q8TAP6 659 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 RNF139Q8WU17 664 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 PLD4Q96BZ4 506 aa12.32□□□□□ -0.44
NUDCD3-211ENST00000497978 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms