RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 CD1EP15812 388 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 TFE3P19532 575 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 EEF1DP29692 281 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 THOP1P52888 689 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 NR1D2Q14995 579 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZNF362Q5T0B9 420 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 TATDN1Q6P1N9 297 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 BNC2Q6ZN30 1099 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 OTOP1Q7RTM1 612 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 RCN3Q96D15 328 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 COX4I2Q96KJ9 171 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 AGAP3Q96P47 875 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 POLR3CQ9BUI4 534 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CCDC106Q9BWC9 280 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 OSBPL6Q9BZF3 934 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 IL1RL2Q9HB29 575 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 DDX4Q9NQI0 724 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 THAP1Q9NVV9 213 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 DMAC2Q9NW81 257 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 BCAP29Q9UHQ4 241 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 TIAM2Q8IVF5 1701 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CLIC3O95833 236 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 FOSP01100 380 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CKMT2P17540 419 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 PTPN1P18031 435 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 RXRBP28702 533 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CLK2P49760 499 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 LIG4P49917 911 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CDH6P55285 790 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 EN1Q05925 392 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 HADHQ16836 314 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 MTX3Q5HYI7 312 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 PPM1JQ5JR12 505 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 SLC44A1Q8WWI5 657 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 GFM2Q969S9 779 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 ATP6V1E2Q96A05 226 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 SCYL1Q96KG9 808 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 GCOM2Q9BZD3 368 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 TMEM8AQ9HCN3 771 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 FAIMQ9NVQ4 179 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 SEPT10Q9P0V9 454 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 VAV3Q9UKW4 847 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 BCORQ6W2J9 1755 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 OSBPP22059 807 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 EPHA3P29320 983 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 CLCN2P51788 898 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 NUP107P57740 925 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 ROR1Q01973 937 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 NFIAQ12857 509 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 TAF5Q15542 800 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 DCAF6Q58WW2 860 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 SLC9A4Q6AI14 798 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 PDZD8Q8NEN9 1154 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 HPS1Q92902 700 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 HEPHQ9BQS7 1158 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 NRDE2Q9H7Z3 1164 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 SACM1LQ9NTJ5 587 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 DAPK2Q9UIK4 370 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 MYRFQ9Y2G1 1151 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 DAGLAQ9Y4D2 1042 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 NR2E3Q9Y5X4 410 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 BCL9O00512 1426 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 KCPQ6ZWJ8 1503 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 hCG_1818297A0A087WSY0 165 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 A6NL46 340 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 AGRPO00253 132 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 BPGMP07738 259 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 KRT19P08727 400 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 SMARCA1P28370 1054 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 DMP1Q13316 513 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 HSF5Q4G112 596 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 FSCBQ5H9T9 825 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 CHSY1Q86X52 802 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 C10orf107Q8IVU9 208 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 DAW1Q8N136 415 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 SIX5Q8N196 739 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 CCNYL1Q8N7R7 359 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 TFB1MQ8WVM0 346 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 C17orf50Q8WW18 174 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 LENG9Q96B70 501 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 SPATA17Q96L03 361 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 BTBD9Q96Q07 612 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 HSD17B14Q9BPX1 270 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 SLC4A5Q9BY07 1137 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 EXOC7Q9UPT5 735 aa10.95□□□□□ -0.66
TRAPPC12-223ENST00000497597 KCNQ2O43526 872 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CSH1P0DML2 217 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 CSH2P0DML3 217 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 PORP16435 677 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 UGT1A6P19224 532 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 UGT1A1P22309 533 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 UGT1A4P22310 534 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 HMOX2P30519 316 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 ADSSP30520 456 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 UGT1A3P35503 534 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 UGT1A5P35504 534 aa10.94□□□□□ -0.66
TRAPPC12-223ENST00000497597 ECE1P42892 770 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms