RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 ABCC13Q9NSE7 274 aa14.79□□□□□ -0.04
VPS26A-209ENST00000497564 TMEM51Q9NW97 253 aa14.79□□□□□ -0.04
VPS26A-209ENST00000497564 EHD2Q9NZN4 543 aa14.79□□□□□ -0.04
VPS26A-209ENST00000497564 PRKAG3Q9UGI9 489 aa14.79□□□□□ -0.04
VPS26A-209ENST00000497564 USP18Q9UMW8 372 aa14.79□□□□□ -0.04
VPS26A-209ENST00000497564 ADH1AP07327 375 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SRGAP2BP0DMP2 458 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 PYGMP11217 842 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 HOXB8P17481 243 aaPredicted RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SP100P23497 879 aaPredicted RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 YWHAQP27348 245 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 IL1R2P27930 398 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 PTPN7P35236 360 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SSR1P43307 286 aaKnown RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SULT1E1P49888 294 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 COPS2P61201 443 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 YWHAGP61981 247 aaKnown RBP eCLIP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 USP46P62068 366 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 TUBB4BP68371 445 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 ATP11AP98196 1134 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 CDO1Q16878 200 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 BOLA3Q53S33 107 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SH3PXD2AQ5TCZ1 1133 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SDHAF4Q5VUM1 108 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SYPL2Q5VXT5 272 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 LILRA6Q6PI73 481 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 TMC5Q6UXY8 1006 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 CYP4V2Q6ZWL3 525 aaPredicted RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 SCD5Q86SK9 330 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 CMASQ8NFW8 434 aaPredicted RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 OVCA2Q8WZ82 227 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 RBM41Q96IZ5 413 aaKnown RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 MS4A14Q96JA4 679 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 NAP1L3Q99457 506 aaPredicted RBP14.78□□□□□ -0.04
VPS26A-209ENST00000497564 EMILIN2Q9BXX0 1053 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 ADAM33Q9BZ11 813 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 NAALADL1Q9UQQ1 740 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 YIPF1Q9Y548 306 aa14.78□□□□□ -0.04
VPS26A-209ENST00000497564 CTAGE15A4D2H0 777 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 SLC38A8A6NNN8 435 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CAPN9O14815 690 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 MDM4O15151 490 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 PRPSAP2O60256 369 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 TADA3O75528 432 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 SOAT2O75908 522 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 ZRANB2O95218 330 aaKnown RBP eCLIP14.77□□□□□ -0.05
VPS26A-209ENST00000497564 IGLV3-25P01717 112 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 ZDHHC11BP0C7U3 371 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CTAGE8P0CG41 777 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 NCAM1P13591 858 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CBX2Q14781 532 aaPredicted RBP14.77□□□□□ -0.05
VPS26A-209ENST00000497564 TAZQ16635 292 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 BTBD8Q5XKL5 378 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 TXNRD3NBQ6F5E7 133 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 MSANTD2Q6P1R3 559 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 RTL10Q7L3V2 364 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CTAGE6Q86UF2 777 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 VSIG1Q86XK7 387 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 PSTKQ8IV42 348 aaKnown RBP14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CTAGE4Q8IX94 777 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 ZNF276Q8N554 614 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 FAM71BQ8TC56 605 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.05
VPS26A-209ENST00000497564 MYRFLQ96LU7 910 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 PEBP4Q96S96 227 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 ADAM7Q9H2U9 754 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 POMKQ9H5K3 350 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CYP4F11Q9HBI6 524 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 MAN1C1Q9NR34 630 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 CLIC5Q9NZA1 410 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 FBXW11Q9UKB1 542 aa14.77□□□□□ -0.05
VPS26A-209ENST00000497564 DOCK6Q96HP0 2047 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 A0A1W2PQH9 124 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 EFCAB8A8MWE9 144 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 RFPL2O75678 378 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 F9P00740 461 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 FGGP02679 453 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 CSH1P0DML2 217 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 CSH2P0DML3 217 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 TFE3P19532 575 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 ELF1P32519 619 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 RDXP35241 583 aaKnown RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 CETN2P41208 172 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 ALDH1A3P47895 512 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 AIF1P55008 147 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 PLD1Q13393 1074 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 ZNF211Q13398 564 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 EIF4EBP2Q13542 120 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 PPP2R5EQ16537 467 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 RAB6CQ53S08 254 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 SNX30Q5VWJ9 437 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 SLC13A5Q86YT5 568 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 PDZD8Q8NEN9 1154 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 SPATA4Q8NEY3 305 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 FBXO32Q969P5 355 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 SLITRK1Q96PX8 696 aa14.76□□□□□ -0.05
VPS26A-209ENST00000497564 PHF7Q9BWX1 381 aaPredicted RBP14.76□□□□□ -0.05
VPS26A-209ENST00000497564 RAB6CQ9H0N0 254 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms