RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 A1BGP04217 495 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 APOA4P06727 396 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 BRAFP15056 766 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 FOSL2P15408 326 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 NPR1P16066 1061 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 ALOX12P18054 663 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 DDCP20711 480 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 SLC7A1P30825 629 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MAPK4P31152 587 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 POLD2P49005 469 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 ZNF131P52739 623 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 SEC24CP53992 1094 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 SUMO3P55854 103 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CTSWP56202 376 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CTXN1P60606 82 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MRPS5P82675 430 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 NOGQ13253 232 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 BMT2Q1RMZ1 405 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CST9Q5W186 159 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 NAIF1Q69YI7 327 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM180AQ6UWF9 173 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM47EQ6ZV65 393 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 SEM1Q6ZVN7 128 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 RASGRP2Q7LDG7 609 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 GALNTL5Q7Z4T8 443 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 XYLT1Q86Y38 959 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 C2CD5Q86YS7 1000 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 ELOA2Q8IYF1 753 aaPredicted RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 TCP11L2Q8N4U5 519 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CELF5Q8N6W0 485 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 TSPYL6Q8N831 410 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 NAT8LQ8N9F0 302 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM71BQ8TC56 605 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CCHCR1Q8TD31 782 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 ADAMTS15Q8TE58 950 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CREB3L4Q8TEY5 395 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 EDAQ92838 391 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 SPAG5Q96R06 1193 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 GDF15Q99988 308 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 PAIP1Q9H074 479 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MANSC1Q9H8J5 431 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MLXIPQ9HAP2 919 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 COL20A1Q9P218 1284 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 ST6GALNAC2Q9UJ37 374 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 VPS28Q9UK41 221 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MAN2B2Q9Y2E5 1009 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 MYO9AB2RTY4 2548 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CNOT1A5YKK6 2376 aaKnown RBP4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 CLTCL1P53675 1640 aa4.06□□□□□ -1.76
EXOSC3-208ENST00000496910 SOS1Q07889 1333 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 RELNP78509 3460 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 TBKBP1A7MCY6 615 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ISM1B1AKI9 464 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 B5MCH6 92 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 FAM155BO75949 473 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 CLTBP09497 229 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 SBK3P0C264 359 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 IL2RBP14784 551 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 PORP16435 677 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 SYN1P17600 705 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 IL11P20809 199 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 COMTP21964 271 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 PTPN7P35236 360 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 TDO2P48775 406 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 HK3P52790 923 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 TGFB2P61812 414 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 CUL4AQ13619 759 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 SCARB2Q14108 478 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 EFR3AQ14156 821 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 PLS1Q14651 629 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ELAVL1Q15717 326 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ASIC2Q16515 512 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ATP2B3Q16720 1220 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 CCDC157Q569K6 752 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 C3orf38Q5JPI3 329 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 METTL24Q5JXM2 366 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 MFSD5Q6N075 450 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 Q6ZRM9 215 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 B4GALNT4Q76KP1 1039 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 BRSK2Q8IWQ3 736 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 OR8H1Q8NGG4 311 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 MGARPQ8TDB4 240 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 OTUD7AQ8TE49 926 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ST8SIA4Q92187 359 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 SLC35A4Q96G79 324 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 TMX3Q96JJ7 454 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 CLPTM1LQ96KA5 538 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 NEU1Q99519 415 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 GPATCH1Q9BRR8 931 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 NDC1Q9BTX1 674 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 C1QTNF3Q9BXJ4 246 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 SENP6Q9GZR1 1112 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 KRT84Q9NSB2 600 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ABCF3Q9NUQ8 709 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 TDP1Q9NUW8 608 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ARGLU1Q9NWB6 273 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 CALCOCO1Q9P1Z2 691 aa4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ADD3Q9UEY8 706 aaKnown RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 FEZ2Q9UHY8 353 aaPredicted RBP4.05□□□□□ -1.76
EXOSC3-208ENST00000496910 ARHGAP26Q9UNA1 814 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms