RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 AGO1Q9UL18 857 aaKnown RBP12.79□□□□□ -0.36
HDLBP-246ENST00000496569 CLEC4EQ9ULY5 219 aa12.79□□□□□ -0.36
HDLBP-246ENST00000496569 MMP17Q9ULZ9 603 aa12.79□□□□□ -0.36
HDLBP-246ENST00000496569 USP18Q9UMW8 372 aa12.79□□□□□ -0.36
HDLBP-246ENST00000496569 CKAP5Q14008 2032 aa12.79□□□□□ -0.36
HDLBP-246ENST00000496569 LAMA1P25391 3075 aa12.79□□□□□ -0.36
HDLBP-246ENST00000496569 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 TBC1D3BA6NDS4 549 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 AXIN1O15169 862 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 THAP12O43422 761 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 TSPAN3O60637 253 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 ADAM23O75077 832 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 APBB3O95704 486 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 PON1P27169 355 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 GNA15P30679 374 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 EIF2DP41214 584 aaKnown RBP12.78□□□□□ -0.36
HDLBP-246ENST00000496569 GRIA2P42262 883 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 DGKEP52429 567 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 EXOC3L4Q17RC7 722 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 MIIPQ5JXC2 388 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 GRAMD4Q6IC98 578 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 GBP6Q6ZN66 633 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 C11orf57Q6ZUT1 292 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-246ENST00000496569 ARHGAP18Q8N392 663 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 TSTD1Q8NFU3 115 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 KCTD13Q8WZ19 329 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 EXOC4Q96A65 974 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 PIWIL1Q96J94 861 aaKnown RBP12.78□□□□□ -0.36
HDLBP-246ENST00000496569 SMOC1Q9H4F8 434 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 ST7Q9NRC1 585 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 DEC1Q9P2X7 70 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 CNTN6Q9UQ52 1028 aa12.78□□□□□ -0.36
HDLBP-246ENST00000496569 MUC22E2RYF6 1773 aaPredicted RBP12.78□□□□□ -0.36
HDLBP-246ENST00000496569 NYNRINQ9P2P1 1898 aaKnown RBP12.78□□□□□ -0.36
HDLBP-246ENST00000496569 NUMA1Q14980 2115 aa12.77□□□□□ -0.36
HDLBP-246ENST00000496569 PES1O00541 588 aaKnown RBP12.77□□□□□ -0.37
HDLBP-246ENST00000496569 CACNG3O60359 315 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 RPP40O75818 363 aaKnown RBP12.77□□□□□ -0.37
HDLBP-246ENST00000496569 PRKCSHP14314 528 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-246ENST00000496569 BCKDHBP21953 392 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 TGM1P22735 817 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 HOXA6P31267 233 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 SGSHP51688 502 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 FYB2Q5VWT5 728 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 LAIR1Q6GTX8 287 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 DPY19L2P1Q6NXN4 242 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 FRMD1Q8N878 549 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 ZNF513Q8N8E2 541 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-246ENST00000496569 MDGA1Q8NFP4 955 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 ADAM32Q8TC27 787 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 RNF139Q8WU17 664 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 GAB3Q8WWW8 586 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 RLN3Q8WXF3 142 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 RMDN1Q96DB5 314 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 THAP9Q9H5L6 903 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 CNGB3Q9NQW8 809 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 MARK1Q9P0L2 795 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 APEX2Q9UBZ4 518 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 GMEB2Q9UKD1 530 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 KIAA1257Q9ULG3 409 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 STRIP2Q9ULQ0 834 aa12.77□□□□□ -0.37
HDLBP-246ENST00000496569 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.77□□□□□ -0.37
HDLBP-246ENST00000496569 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-246ENST00000496569 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 E5RJQ4 531 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 LTFP02788 710 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 FYNP06241 537 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 CISD3P0C7P0 127 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 GPD2P43304 727 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 DGKGP49619 791 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 MFAP3P55082 362 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 PITX1P78337 314 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-246ENST00000496569 MRPS21P82921 87 aaKnown RBP12.76□□□□□ -0.37
HDLBP-246ENST00000496569 COG7P83436 770 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 KCNMA1Q12791 1236 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 TRIP4Q15650 581 aaPredicted RBP12.76□□□□□ -0.37
HDLBP-246ENST00000496569 CRY1Q16526 586 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 GEN1Q17RS7 908 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 TADA2BQ86TJ2 420 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 ZNF276Q8N554 614 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 ZNF606Q8WXB4 792 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 SHC3Q92529 594 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 FAM149B1Q96BN6 582 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 GBP4Q96PP9 640 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 CDK5RAP1Q96SZ6 601 aaKnown RBP12.76□□□□□ -0.37
HDLBP-246ENST00000496569 TUBGCP2Q9BSJ2 902 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 SLC6A17Q9H1V8 727 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 NDST4Q9H3R1 872 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 CD93Q9NPY3 652 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 PLCB1Q9NQ66 1216 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 DNAJC12Q9UKB3 198 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 FHOD1Q9Y613 1164 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 RAD54BQ9Y620 910 aa12.76□□□□□ -0.37
HDLBP-246ENST00000496569 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms