RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 IRF1P10914 325 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 ACSL1P33121 698 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 AFMP43652 599 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 ST3GAL1Q11201 340 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 NUP93Q8N1F7 819 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 KCTD17Q8N5Z5 321 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 FBXO32Q969P5 355 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 MYLPFQ96A32 169 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 VCPIP1Q96JH7 1222 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 TRIM9Q9C026 710 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 LRRC4CQ9HCJ2 640 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 ZSWIM6Q9HCJ5 1215 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 NCKAP1Q9Y2A7 1128 aa12.38□□□□□ -0.43
ATG3-209ENST00000496423 F8VP50 259 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 WNT7AO00755 349 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 GABRDO14764 452 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 CDC45O75419 566 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 DNTTP04053 509 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 ITGB3P05106 788 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 CISD3P0C7P0 127 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 ACO1P21399 889 aaKnown RBP12.37□□□□□ -0.43
ATG3-209ENST00000496423 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
ATG3-209ENST00000496423 TUBP50607 506 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 COPAP53621 1224 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 RIPPLY3P57055 190 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 DAB2P98082 770 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 ENPP2Q13822 863 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 ZNF174Q15697 407 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
ATG3-209ENST00000496423 BMP2KLQ5H9B9 411 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 PRAMEF14Q5SWL7 426 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 LAYNQ6UX15 382 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 HS2ST1Q7LGA3 356 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 EXD3Q8N9H8 876 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 OR2T3Q8NH03 318 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 KCNN1Q92952 543 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 SEMA3CQ99985 751 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 LARP6Q9BRS8 491 aaKnown RBP12.37□□□□□ -0.43
ATG3-209ENST00000496423 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 AASDHPPTQ9NRN7 309 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 AGO2Q9UKV8 859 aaKnown RBP12.37□□□□□ -0.43
ATG3-209ENST00000496423 SRPK3Q9UPE1 567 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 SLC27A6Q9Y2P4 619 aa12.37□□□□□ -0.43
ATG3-209ENST00000496423 TEP1Q99973 2627 aaKnown RBP12.37□□□□□ -0.43
ATG3-209ENST00000496423 TIMM44O43615 452 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 TRAK2O60296 914 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 GJB6O95452 261 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 ITGB2P05107 769 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 KRT19P08727 400 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 CD38P28907 300 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 EPHA8P29322 1005 aaPredicted RBP12.36□□□□□ -0.43
ATG3-209ENST00000496423 RBP5P82980 135 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
ATG3-209ENST00000496423 TLE1Q04724 770 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 POSTNQ15063 836 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 ARL13BQ3SXY8 428 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 KCNT1Q5JUK3 1230 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 SERPINA13PQ6UXR4 307 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 USP53Q70EK8 1073 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 CACUL1Q86Y37 369 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 MYCBPAPQ8TBZ2 947 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 HPS3Q969F9 1004 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 CCNL2Q96S94 520 aaPredicted RBP12.36□□□□□ -0.43
ATG3-209ENST00000496423 ABCG4Q9H172 646 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 CHORDC1Q9UHD1 332 aaPredicted RBP12.36□□□□□ -0.43
ATG3-209ENST00000496423 ITGA11Q9UKX5 1188 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 PCDHB1Q9Y5F3 818 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 SLCO1B1Q9Y6L6 691 aa12.36□□□□□ -0.43
ATG3-209ENST00000496423 A0A1W2PPC4 97 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 K7ENM7 598 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 ATP2C2O75185 946 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 TRAPPC10P48553 1259 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 PSMC1P62191 440 aaKnown RBP12.35□□□□□ -0.43
ATG3-209ENST00000496423 NFKB2Q00653 900 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 ZNF234Q14588 700 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 EIF4HQ15056 248 aaKnown RBP12.35□□□□□ -0.43
ATG3-209ENST00000496423 SNX30Q5VWJ9 437 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 KIAA0895LQ68EN5 471 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 OSTM1Q86WC4 334 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 FAM26EQ8N5C1 309 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 GOLGA1Q92805 767 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 GRAMD1AQ96CP6 724 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 LIN37Q96GY3 246 aaPredicted RBP12.35□□□□□ -0.43
ATG3-209ENST00000496423 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATG3-209ENST00000496423 ELOVL4Q9GZR5 314 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 OCEL1Q9H607 264 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 ERVMER34-1Q9H9K5 563 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 PDRG1Q9NUG6 133 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 COMMD8Q9NX08 183 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 FBXO10Q9UK96 956 aa12.35□□□□□ -0.43
ATG3-209ENST00000496423 ODF2LQ9ULJ1 636 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms