RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 KRT5P13647 590 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 CNR2P34972 360 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 ZNF132P52740 706 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 SLC8A3P57103 927 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 DAOAP59103 153 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 MRPS21P82921 87 aaKnown RBP11.12□□□□□ -0.63
NELFE-213ENST00000494956 GOLGA8FQ08AF8 430 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 GOLGA8DPQ0D2H9 430 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 SF3A2Q15428 464 aaKnown RBP11.12□□□□□ -0.63
NELFE-213ENST00000494956 PLK5Q496M5 336 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 BSPRYQ5W0U4 402 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 EGFLAMQ63HQ2 1017 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 GRAMD4Q6IC98 578 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 DENND1BQ6P3S1 775 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 FOXR2Q6PJQ5 311 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 ZNF513Q8N8E2 541 aaPredicted RBP11.12□□□□□ -0.63
NELFE-213ENST00000494956 TERB1Q8NA31 727 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 SLC35F5Q8WV83 523 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 IPO9Q96P70 1041 aaKnown RBP11.12□□□□□ -0.63
NELFE-213ENST00000494956 DUSP15Q9H1R2 295 aaPredicted RBP11.12□□□□□ -0.63
NELFE-213ENST00000494956 RXFP3Q9NSD7 469 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 SEMA4GQ9NTN9 838 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 DEC1Q9P2X7 70 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 NUP205Q92621 2012 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 CEP192Q8TEP8 1941 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 TCRBV21S2A2A0A5A6 115 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 FAM170AA1A519 330 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 BECN2A8MW95 431 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 WASH3PC4AMC7 463 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 CACNG3O60359 315 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 TSPAN3O60637 253 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 GNA14O95837 355 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 SETSIPP0DME0 302 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 ANP32AP39687 249 aaKnown RBP11.11□□□□□ -0.63
NELFE-213ENST00000494956 TNFRSF4P43489 277 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 GCNT1Q02742 428 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 CETN1Q12798 172 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 CNGA2Q16280 664 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 ARHGAP44Q17R89 818 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 FYB2Q5VWT5 728 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 TRIM65Q6PJ69 517 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 CACNA2D4Q7Z3S7 1137 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 SIX6OS1Q8N1H7 587 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 ZNF276Q8N554 614 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 HMGB4Q8WW32 186 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 KCTD13Q8WZ19 329 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 MIS12Q9H081 205 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 FAM124BQ9H5Z6 455 aaPredicted RBP11.11□□□□□ -0.63
NELFE-213ENST00000494956 LMBRD1Q9NUN5 540 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 CYTH4Q9UIA0 394 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 RAD54BQ9Y620 910 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
NELFE-213ENST00000494956 CCDC163A0A0D9SF12 145 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.1□□□□□ -0.63
NELFE-213ENST00000494956 GOLGA6L7A0A1B0GV03 622 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.1□□□□□ -0.63
NELFE-213ENST00000494956 LETM1O95202 739 aaPredicted RBP11.1□□□□□ -0.63
NELFE-213ENST00000494956 PNMA6AP0CW24 399 aaPredicted RBP11.1□□□□□ -0.63
NELFE-213ENST00000494956 GBP1P32455 592 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 USP8P40818 1118 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 DGKGP49619 791 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 SGSHP51688 502 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 COG7P83436 770 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 GEN1Q17RS7 908 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 TCEAL6Q6IPX3 200 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 KIAA1211LQ6NV74 962 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 PRR23CQ6ZRP0 262 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 TADA2BQ86TJ2 420 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 ARHGAP18Q8N392 663 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 TCEAL3Q969E4 200 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 XPO6Q96QU8 1125 aaKnown RBP11.1□□□□□ -0.63
NELFE-213ENST00000494956 NUP62CLQ9H1M0 184 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 SLC6A17Q9H1V8 727 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 SIX2Q9NPC8 291 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 CD93Q9NPY3 652 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 CNGB3Q9NQW8 809 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 CACNA2D2Q9NY47 1150 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 KIAA1257Q9ULG3 409 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 STRIP2Q9ULQ0 834 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 CNTN6Q9UQ52 1028 aa11.1□□□□□ -0.63
NELFE-213ENST00000494956 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 MED19A0JLT2 244 aaPredicted RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 DCDC2BA2VCK2 349 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 EPN2O95208 641 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 FGFR1OPO95684 399 aaKnown RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 PENKP01210 267 aaPredicted RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 LTFP02788 710 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 FYNP06241 537 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 HOXB2P14652 356 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 GABRG2P18507 467 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 PON1P27169 355 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 GPD2P43304 727 aa11.09□□□□□ -0.63
NELFE-213ENST00000494956 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
NELFE-213ENST00000494956 ATXN1P54253 815 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms