RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 GALR2O43603 387 aaPredicted RBP17.89■□□□□ 0.45
SNX17-209ENST00000494893 RPS9P46781 194 aaKnown RBP17.89■□□□□ 0.45
SNX17-209ENST00000494893 GALK1P51570 392 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 PITX1P78337 314 aaPredicted RBP17.89■□□□□ 0.45
SNX17-209ENST00000494893 COG7P83436 770 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 CDR2Q01850 454 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 CCINQ13939 588 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 TRIP4Q15650 581 aaPredicted RBP17.89■□□□□ 0.45
SNX17-209ENST00000494893 E4F1Q66K89 784 aaPredicted RBP17.89■□□□□ 0.45
SNX17-209ENST00000494893 OLFML1Q6UWY5 402 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 FAM183BPQ6ZVS7 135 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 TMEM25Q86YD3 366 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 DQX1Q8TE96 717 aaKnown RBP17.89■□□□□ 0.45
SNX17-209ENST00000494893 OTUB2Q96DC9 234 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 PCDHB18PQ96TA0 734 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 LMAN1LQ9HAT1 526 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 IMPACTQ9P2X3 320 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 MUC6Q6W4X9 2439 aa17.89■□□□□ 0.45
SNX17-209ENST00000494893 ANTXRLA6NF34 631 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 IGLV3-27P01718 113 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 CYP1A1P04798 512 aaPredicted RBP17.88■□□□□ 0.45
SNX17-209ENST00000494893 CORO1AP31146 461 aaKnown RBP17.88■□□□□ 0.45
SNX17-209ENST00000494893 GABRB2P47870 512 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 SLC6A11P48066 632 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 C2CD6Q53TS8 623 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 C1orf228Q6PIY5 440 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 Q6ZS52 159 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 BEND5Q7L4P6 421 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 ZNF677Q86XU0 584 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 TMEM35BQ8NCS4 154 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 RNF139Q8WU17 664 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 FAM149B1Q96BN6 582 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 SYT11Q9BT88 431 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 CHRDQ9H2X0 955 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 SPHK2Q9NRA0 654 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 LSM7Q9UK45 103 aaKnown RBP17.88■□□□□ 0.45
SNX17-209ENST00000494893 AGO1Q9UL18 857 aaKnown RBP17.88■□□□□ 0.45
SNX17-209ENST00000494893 STRIP2Q9ULQ0 834 aa17.88■□□□□ 0.45
SNX17-209ENST00000494893 HBS1LQ9Y450 684 aaKnown RBP17.88■□□□□ 0.45
SNX17-209ENST00000494893 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.88■□□□□ 0.45
SNX17-209ENST00000494893 SART1O43290 800 aaKnown RBP17.87■□□□□ 0.45
SNX17-209ENST00000494893 LSM8O95777 96 aaKnown RBP17.87■□□□□ 0.45
SNX17-209ENST00000494893 EGFP01133 1207 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 ADH5P11766 374 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 NCAM1P13591 858 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 NUBP1P53384 320 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 ARID5AQ03989 594 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 GOLGA8FQ08AF8 430 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 GOLGA8DPQ0D2H9 430 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 NR1H3Q13133 447 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 TBX2Q13207 712 aaPredicted RBP17.87■□□□□ 0.45
SNX17-209ENST00000494893 NAA35Q5VZE5 725 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 IRF2BP2Q7Z5L9 587 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 TAC4Q86UU9 113 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 SFTPA1Q8IWL2 248 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 ETFBKMTQ8IXQ9 262 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 MAML2Q8IZL2 1156 aaPredicted RBP17.87■□□□□ 0.45
SNX17-209ENST00000494893 PHTF2Q8N3S3 785 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 CPA5Q8WXQ8 436 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 CD101Q93033 1021 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 PLD4Q96BZ4 506 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 SLC2A13Q96QE2 648 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 P2RY13Q9BPV8 354 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 HCN4Q9Y3Q4 1203 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 MIA3Q5JRA6 1907 aa17.87■□□□□ 0.45
SNX17-209ENST00000494893 LRRC53A6NM62 1247 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 GOLGA6L6A8MZA4 724 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 GFRA2O00451 464 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 HOXC11O43248 304 aaPredicted RBP17.86■□□□□ 0.45
SNX17-209ENST00000494893 GRAP2O75791 330 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 ADH1CP00326 375 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 IGLV3-25P01717 112 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 CHRM1P11229 460 aaPredicted RBP17.86■□□□□ 0.45
SNX17-209ENST00000494893 YWHAZP63104 245 aaKnown RBP17.86■□□□□ 0.45
SNX17-209ENST00000494893 MTAPQ13126 283 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 EIF4EBP2Q13542 120 aaPredicted RBP17.86■□□□□ 0.45
SNX17-209ENST00000494893 OR6B2Q6IFH4 312 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 PKN3Q6P5Z2 889 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 CACNA2D4Q7Z3S7 1137 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 XYLT1Q86Y38 959 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 DENND1CQ8IV53 801 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 FAM217AQ8IXS0 508 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 DEFB106AQ8N104 65 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 ADAM32Q8TC27 787 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 SLC39A13Q96H72 371 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 FCRL2Q96LA5 508 aaPredicted RBP17.86■□□□□ 0.45
SNX17-209ENST00000494893 NOX5Q96PH1 765 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 NUP58Q9BVL2 599 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 ADAM33Q9BZ11 813 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 DCLK3Q9C098 648 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 KCNH6Q9H252 994 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 PDCL3Q9H2J4 239 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 POPDC2Q9HBU9 364 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 ASNSD1Q9NWL6 643 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 C2orf42Q9NWW7 574 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 MARK1Q9P0L2 795 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 MYO6Q9UM54 1294 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 CEP83Q9Y592 693 aa17.86■□□□□ 0.45
SNX17-209ENST00000494893 TRIM24O15164 1050 aa17.85■□□□□ 0.45
SNX17-209ENST00000494893 NCAM2O15394 837 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms