RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 BTBD8Q5XKL5 378 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 CCDC26Q8TAB7 109 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 SMARCE1Q969G3 411 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 ULBP1Q9BZM6 244 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 CLIC5Q9NZA1 410 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 BCCIPQ9P287 314 aaKnown RBP eCLIP12.23□□□□□ -0.45
VTI1A-208ENST00000494728 LSM7Q9UK45 103 aaKnown RBP12.23□□□□□ -0.45
VTI1A-208ENST00000494728 CLEC4EQ9ULY5 219 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 RAD54BQ9Y620 910 aa12.23□□□□□ -0.45
VTI1A-208ENST00000494728 PCNX2A6NKB5 2137 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 ITPR1Q14643 2758 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 O00370 1275 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 RHOBTB1O94844 696 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 DHPSP49366 369 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TKTL1P51854 596 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 YWHAGP61981 247 aaKnown RBP eCLIP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 FKBP3Q00688 224 aaKnown RBP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 ADIGQ0VDE8 80 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 HSF5Q4G112 596 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TMEFF1Q8IYR6 380 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 ZNF276Q8N554 614 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 ANKRD52Q8NB46 1076 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 UBA3Q8TBC4 463 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TFAP2BQ92481 460 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TIGD1Q96MW7 591 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TSG101Q99816 390 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 TMEM74BQ9NUR3 256 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 CACNA2D2Q9NY47 1150 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 AGO1Q9UL18 857 aaKnown RBP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
VTI1A-208ENST00000494728 STARD13Q9Y3M8 1113 aa12.22□□□□□ -0.45
VTI1A-208ENST00000494728 YJEFN3A6XGL0 299 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 WASH3PC4AMC7 463 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 E7ENQ6 273 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 XPO1O14980 1071 aaKnown RBP12.21□□□□□ -0.45
VTI1A-208ENST00000494728 STX10O60499 249 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 FOXD2O60548 495 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-208ENST00000494728 ALDH1A2O94788 518 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 SMC2O95347 1197 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 PENKP01210 267 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-208ENST00000494728 NDUFV2P19404 249 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 TRIM21P19474 475 aaKnown RBP12.21□□□□□ -0.45
VTI1A-208ENST00000494728 CORO1AP31146 461 aaKnown RBP12.21□□□□□ -0.45
VTI1A-208ENST00000494728 FMO5P49326 533 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 PSEN1P49768 467 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 MFAP3P55082 362 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 NUCB2P80303 420 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 GEN1Q17RS7 908 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 PKDCCQ504Y2 493 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 SGO2Q562F6 1265 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 RNF43Q68DV7 783 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 IL31Q6EBC2 164 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 KLHL10Q6JEL2 608 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 CYP2U1Q7Z449 544 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 DENND1CQ8IV53 801 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 LMO3Q8TAP4 145 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 POLMQ9NP87 494 aaPredicted RBP12.21□□□□□ -0.45
VTI1A-208ENST00000494728 FSCN3Q9NQT6 498 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 FBXO10Q9UK96 956 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 CTNND2Q9UQB3 1225 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 PKD1L2Q7Z442 2459 aa12.21□□□□□ -0.45
VTI1A-208ENST00000494728 ANKRD11Q6UB99 2663 aaPredicted RBP12.21□□□□□ -0.46
VTI1A-208ENST00000494728 TMEM131Q92545 1883 aa12.21□□□□□ -0.46
VTI1A-208ENST00000494728 NBEAQ8NFP9 2946 aa12.21□□□□□ -0.46
VTI1A-208ENST00000494728 GOLGA6L4A6NEF3 574 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 C4orf47A7E2U8 309 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 RNF225M0QZC1 329 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 PIK3R2O00459 728 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 BIN1O00499 593 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 CDX4O14627 284 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 GIPC1O14908 333 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 MSI1O43347 362 aaKnown RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 ZBED1O96006 694 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 RALAP11233 206 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 CD19P15391 556 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 ITPKAP23677 461 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 NTSR1P30989 418 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 DGKGP49619 791 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 BCAT1P54687 386 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 IRX4P78413 519 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 GOLGA8FQ08AF8 430 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 GOLGA8DPQ0D2H9 430 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 BST2Q10589 180 aaKnown RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 MORC3Q14149 939 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 BECN1Q14457 450 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 ARHGEF19Q8IW93 802 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 CHPFQ8IZ52 775 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 TTC39CQ8N584 583 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 DEFB119Q8N690 84 aa12.2□□□□□ -0.46
VTI1A-208ENST00000494728 RBBP8NLQ8NC74 664 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-208ENST00000494728 IPO4Q8TEX9 1081 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms