RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 ITGA8P53708 1063 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC5A3P53794 718 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GALCP54803 685 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 VCPP55072 806 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 FOXO4P98177 505 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZNF200P98182 395 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 FKBP3Q00688 224 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 TFAP4Q01664 338 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZBTB16Q05516 673 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GALNT2Q10471 571 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GALNT1Q10472 559 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 FOXD4Q12950 439 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 COASYQ13057 564 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ATP1A4Q13733 1029 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TUBA3CQ13748 450 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 DPYSQ14117 519 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ELOAQ14241 798 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 CTTNQ14247 550 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 EFTUD2Q15029 972 aaKnown RBP eCLIP2.82□□□□□ -1.961e-5■■■□□ 16.7
MDC1-208ENST00000494654 OXA1LQ15070 435 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 EPHA7Q15375 998 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC1A5Q15758 541 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 KCNJ8Q15842 424 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MOGQ16653 247 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MAPK6Q16659 721 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PFKFB3Q16875 520 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 C15orf59Q2T9L4 293 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 KLHL38Q2WGJ6 581 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 LSM12Q3MHD2 195 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 SGO2Q562F6 1265 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PLEKHG4Q58EX7 1191 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ARSJQ5FYB0 599 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 WDR44Q5JSH3 913 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 WDR45BQ5MNZ6 344 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 COX20Q5RI15 118 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 NDUFAF5Q5TEU4 345 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 IRAK1BP1Q5VVH5 260 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 KAZNQ674X7 775 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ATG16L1Q676U5 607 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CTRB2Q6GPI1 263 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TWF2Q6IBS0 349 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 CCSAPQ6IQ19 270 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZFP1Q6P2D0 407 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZNF530Q6P9A1 599 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 PGM2L1Q6PCE3 622 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 LYPD4Q6UWN0 246 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 RNF111Q6ZNA4 994 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GADL1Q6ZQY3 521 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PRR23CQ6ZRP0 262 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 LINC00299Q6ZSB3 139 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MFSD6Q6ZSS7 791 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PIK3AP1Q6ZUJ8 805 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 NEK10Q6ZWH5 1172 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SMIM5Q71RC9 77 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SV2AQ7L0J3 742 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 EEPD1Q7L9B9 569 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 LRP10Q7Z4F1 713 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 IRF2BP2Q7Z5L9 587 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GPR141Q7Z602 305 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 UBE2Q1Q7Z7E8 422 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 AMIGO2Q86SJ2 522 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TTC7BQ86TV6 843 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC51BQ86UW2 128 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 HEATR4Q86WZ0 1026 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CARM1Q86X55 608 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC13A5Q86YT5 568 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 GRAMD2AQ8IUY3 354 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 RTKN2Q8IZC4 609 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 BLIDQ8IZY5 108 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MYO1HQ8N1T3 1032 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 TTC30BQ8N4P2 665 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 FIBCD1Q8N539 461 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ZNF276Q8N554 614 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CCDC33Q8N5R6 958 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 POU5F2Q8N7G0 328 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 LSMEM1Q8N8F7 131 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 FANCBQ8NB91 859 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC43A3Q8NBI5 491 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 NEDD1Q8NHV4 660 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC30A5Q8TAD4 765 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GABPB2Q8TAK5 448 aaPredicted RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 RIN3Q8TB24 985 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 HCAR2Q8TDS4 363 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ACTRT2Q8TDY3 377 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 ADAMTS16Q8TE57 1224 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 PPP4R1Q8TF05 950 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 GIPC2Q8TF65 315 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 SLC16A10Q8TF71 515 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 MZB1Q8WU39 189 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 AFG1LQ8WV93 481 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 LARP4BQ92615 738 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 ALG3Q92685 438 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 RPGRQ92834 1020 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 GLG1Q92896 1179 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 IRF7Q92985 503 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 CD101Q93033 1021 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 HPS3Q969F9 1004 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 VTI1AQ96AJ9 217 aa2.82□□□□□ -1.96
MDC1-208ENST00000494654 C12orf43Q96C57 262 aaKnown RBP2.82□□□□□ -1.96
MDC1-208ENST00000494654 RMND5BQ96G75 393 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms