RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CYP4A22Q5TCH4 519 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 ATL3Q6DD88 541 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 ARMCX5Q6P1M9 558 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 STXBP4Q6ZWJ1 553 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 MTSS1LQ765P7 747 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 ELMOD1Q8N336 334 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 PGLYRP2Q96PD5 576 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 PYM1Q9BRP8 204 aaKnown RBP8.7□□□□□ -1.02
RIF1-211ENST00000494333 CBWD1Q9BRT8 395 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 CEP72Q9P209 647 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 CA14Q9ULX7 337 aa8.7□□□□□ -1.02
RIF1-211ENST00000494333 KPNA7A9QM74 516 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 ZNF197O14709 1029 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 EXTL3O43909 919 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 MYL4P12829 197 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 CASP1P29466 404 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 AFMP43652 599 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 TAF6P49848 677 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 CDR1P51861 262 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 GP2P55259 537 aaKnown RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 MYBPC2Q14324 1141 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 CLEC16AQ2KHT3 1053 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 ANKRD39Q53RE8 183 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 CWF19L1Q69YN2 538 aaKnown RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 VHLLQ6RSH7 139 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 PDZD4Q76G19 769 aaPredicted RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 TMPRSS7Q7RTY8 843 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 METTL23Q86XA0 190 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 EFCAB13Q8IY85 973 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 THEM5Q8N1Q8 247 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 GPD1LQ8N335 351 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 CSGALNACT2Q8N6G5 542 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 ATAD1Q8NBU5 361 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 ENOX1Q8TC92 643 aaKnown RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 CACTINQ8WUQ7 758 aaKnown RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 HNRNPLLQ8WVV9 542 aaKnown RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 TCEAL4Q96EI5 215 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 BORCS6Q96GS4 357 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 TMEM209Q96SK2 561 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 C7orf25Q9BPX7 421 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 KXD1Q9BQD3 176 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 RTP3Q9BQQ7 232 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 BLZF1Q9H2G9 400 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 PDE11AQ9HCR9 933 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 RBAKQ9NYW8 714 aaPredicted RBP8.69□□□□□ -1.02
RIF1-211ENST00000494333 GDE1Q9NZC3 331 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 RCOR1Q9UKL0 485 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 DSEQ9UL01 958 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 AGAP1Q9UPQ3 857 aa8.69□□□□□ -1.02
RIF1-211ENST00000494333 VWA8A3KMH1 1905 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 TRIP11Q15643 1979 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 MTMR11A4FU01 709 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 KIAA0391O15091 583 aaKnown RBP8.68□□□□□ -1.02
RIF1-211ENST00000494333 VNN2O95498 520 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 PRAMEF1O95521 474 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 ESR1P03372 595 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 ITGB3P05106 788 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 KRT19P08727 400 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 GJA1P17302 382 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 CEBPBP17676 345 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 AOC1P19801 751 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 FUT4P22083 530 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 HOXD13P35453 343 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 CCR2P41597 374 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 ALDH1A3P47895 512 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 FAM26FQ5R3K3 315 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 RESP18Q5W5W9 173 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 WSCD1Q658N2 575 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 TANGO2Q6ICL3 276 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 CENPPQ6IPU0 288 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 KIAA1211LQ6NV74 962 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 CNNM4Q6P4Q7 775 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 UNC13DQ70J99 1090 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 BRSK2Q8IWQ3 736 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 OR10T2Q8NGX3 314 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 ATOH1Q92858 354 aaPredicted RBP8.68□□□□□ -1.02
RIF1-211ENST00000494333 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 PLA2G2FQ9BZM2 168 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 IRF2BPLQ9H1B7 796 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 CARS2Q9HA77 564 aaKnown RBP8.68□□□□□ -1.02
RIF1-211ENST00000494333 MAGEF1Q9HAY2 307 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 SLC2A4RGQ9NR83 387 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 ZNF451Q9Y4E5 1061 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 YIPF1Q9Y548 306 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 MYH11P35749 1972 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 C2orf16Q68DN1 1984 aa8.68□□□□□ -1.02
RIF1-211ENST00000494333 ZNF233A6NK53 670 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 CLIC2O15247 247 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 EIF3DO15371 548 aaKnown RBP eCLIP8.67□□□□□ -1.02
RIF1-211ENST00000494333 CBFA2T2O43439 604 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 KLF4O43474 513 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 SIGLEC6O43699 453 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 TMEM191BP0C7N4 346 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 PNPLA4P41247 253 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 TUFMP49411 452 aaKnown RBP8.67□□□□□ -1.02
RIF1-211ENST00000494333 MRE11P49959 708 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 EPHB3P54753 998 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 PLD1Q13393 1074 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 CUL4BQ13620 913 aa8.67□□□□□ -1.02
RIF1-211ENST00000494333 SV2CQ496J9 727 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms