RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 SAP30LQ9HAJ7 183 aa8.28□□□□□ -1.08
HMGB3P14-201ENST00000494195 ADARB2Q9NS39 739 aaKnown RBP8.28□□□□□ -1.08
HMGB3P14-201ENST00000494195 CGB1A6NKQ9 187 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 TMEM232C9JQI7 657 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 CLIC1O00299 241 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 IL6STP40189 918 aaPredicted RBP8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 FOXF2Q12947 444 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 MFSD13AQ14CX5 517 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 SKAP1Q86WV1 359 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 SRRM1Q8IYB3 904 aaKnown RBP8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 C8orf58Q8NAV2 365 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 WDR12Q9GZL7 423 aaKnown RBP8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 SLC52A1Q9NWF4 448 aa8.27□□□□□ -1.09
HMGB3P14-201ENST00000494195 FYB1O15117 783 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 DHHO43323 396 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 NTSR2O95665 410 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 CERS1P27544 350 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 GALNSP34059 522 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 GSTM5P46439 218 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 RHBDL3P58872 404 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 SRSF4Q08170 494 aaKnown RBP8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 BFSP2Q13515 415 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 TTC30AQ86WT1 665 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 DDB2Q92466 427 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 HIC2Q96JB3 615 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 IGSF9Q9P2J2 1179 aa8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 MAGED2Q9UNF1 606 aaPredicted RBP8.26□□□□□ -1.09
HMGB3P14-201ENST00000494195 GOLGA6L3A6NEY3 463 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 J3KTA2 159 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 PCDH17O14917 1159 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 PIP5K1BO14986 540 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 FFAR2O15552 330 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 MBPP02686 304 aaPredicted RBP8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 TUBB4AP04350 444 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 CYP2D6P10635 497 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 MMP8P22894 467 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 TNFAIP2Q03169 654 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 SEMA3BQ13214 749 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 MORC3Q14149 939 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 AWAT1Q58HT5 328 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 CCDC144NLQ6NUI1 221 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 PIK3AP1Q6ZUJ8 805 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 SPICE1Q8N0Z3 855 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 PNISRQ8TF01 805 aaKnown RBP8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 C5orf34Q96MH7 638 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 EIF3CQ99613 913 aaKnown RBP8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 PLCB1Q9NQ66 1216 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 DAAM1Q9Y4D1 1078 aa8.25□□□□□ -1.09
HMGB3P14-201ENST00000494195 A0A087WV62 115 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 PNMA6EA0A0J9YXQ4 647 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 CELA2AP08217 269 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 NPPBP16860 134 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 RAE1P78406 368 aaKnown RBP8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 P3H1Q32P28 736 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 RANBP10Q6VN20 620 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 ZNF813Q6ZN06 617 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 ZNF527Q8NB42 609 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 ADGRE3Q9BY15 652 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 FSCN3Q9NQT6 498 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 SEMA5BQ9P283 1151 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 PCDHB2Q9Y5E7 798 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 SPATA31A1Q5TZJ5 1347 aa8.24□□□□□ -1.09
HMGB3P14-201ENST00000494195 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 PPP6CO00743 305 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 CTIFO43310 598 aaKnown RBP8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 JAK3P52333 1124 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 CSHL1Q14406 222 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 TRIM71Q2Q1W2 868 aaKnown RBP8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 CEP78Q5JTW2 689 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 PGBD2Q6P3X8 592 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 C1orf228Q6PIY5 440 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 GALNT16Q8N428 558 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 ZNF398Q8TD17 642 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 PRPF18Q99633 342 aaKnown RBP8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 ABHD10Q9NUJ1 306 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 MAFFQ9ULX9 164 aa8.23□□□□□ -1.09
HMGB3P14-201ENST00000494195 TAF5LO75529 589 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 RNF8O76064 485 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 ANXA6P08133 673 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 MATN1P21941 496 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 DUSP1P28562 367 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 EPHB2P29323 1055 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 MPGP29372 298 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 IGHMBP2P38935 993 aaKnown RBP8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 WDR5P61964 334 aaKnown RBP8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 SLC14A1Q13336 389 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 CC2D1BQ5T0F9 858 aaKnown RBP8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 MSANTD2Q6P1R3 559 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 GATAD2AQ86YP4 633 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 CRB3Q9BUF7 120 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 EFHD1Q9BUP0 239 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 RNF26Q9BY78 433 aaPredicted RBP8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 EPS8L2Q9H6S3 715 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 TAGLN3Q9UI15 199 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 VPS4AQ9UN37 437 aa8.22□□□□□ -1.09
HMGB3P14-201ENST00000494195 AQP12BA6NM10 295 aa8.21□□□□□ -1.1
HMGB3P14-201ENST00000494195 NPC1O15118 1278 aa8.21□□□□□ -1.1
HMGB3P14-201ENST00000494195 ITGA5P08648 1049 aa8.21□□□□□ -1.1
HMGB3P14-201ENST00000494195 ALDH18A1P54886 795 aaKnown RBP8.21□□□□□ -1.1
HMGB3P14-201ENST00000494195 SPARCL1Q14515 664 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms