RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 PRR16Q569H4 304 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 C1orf228Q6PIY5 440 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 CEP57Q86XR8 500 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 RELL1Q8IUW5 271 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 FAM186BQ8IYM0 893 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 TEX9Q8N6V9 391 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 SLC35G2Q8TBE7 412 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 ETNPPLQ8TBG4 499 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 GRK7Q8WTQ7 553 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 LENG9Q96B70 501 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 ZC3H10Q96K80 434 aaKnown RBP11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 FAM81BQ96LP2 452 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 EPB41L4BQ9H329 900 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 BRD9Q9H8M2 597 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 ZNF334Q9HCZ1 680 aaPredicted RBP11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 APEX2Q9UBZ4 518 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 ADAM28Q9UKQ2 775 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 C15orf41Q9Y2V0 281 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 ARL2BPQ9Y2Y0 163 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 PIAS3Q9Y6X2 628 aa11.11□□□□□ -0.63
PDLIM1-205ENST00000493949 ARL5CA6NH57 179 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 PPP1R12AO14974 1030 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 STBD1O95210 358 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 NQO1P15559 274 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 TNFAIP3P21580 790 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 HOXA11P31270 313 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 PTGIRP43119 386 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 FMO5P49326 533 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 SPIRE1Q08AE8 756 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 LRRC32Q14392 662 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ECM1Q16610 540 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ZNF568Q3ZCX4 644 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ARSHQ5FYA8 562 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 RTP2Q5QGT7 225 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 HEATR6Q6AI08 1181 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 HIBCHQ6NVY1 386 aaPredicted RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 PPP1R2P3Q6NXS1 205 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ZDHHC24Q6UX98 284 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 PPP1R21Q6ZMI0 780 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 PDZD3Q86UT5 571 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 NELFCDQ8IXH7 590 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 C12orf56Q8IXR9 622 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 SMG8Q8ND04 991 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 GLIS3Q8NEA6 775 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 OR2W6PQ8NHA6 318 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 FBF1Q8TES7 1133 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ART4Q93070 314 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 MCRS1Q96EZ8 462 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 MSANTD3Q96H12 275 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ZSWIM1Q9BR11 485 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 REEP2Q9BRK0 252 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 TRMT61BQ9BVS5 477 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 NIFKQ9BYG3 293 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 UNC45AQ9H3U1 944 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 IFT122Q9HBG6 1241 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 TXLNGQ9NUQ3 528 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 MIOSQ9NXC5 875 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 GRHL1Q9NZI5 618 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 UVRAGQ9P2Y5 699 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 CACNG4Q9UBN1 327 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 LGALS13Q9UHV8 139 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 FRMD4BQ9Y2L6 1034 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 MSRB2Q9Y3D2 182 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 MRPS23Q9Y3D9 190 aaKnown RBP11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 CFAP46Q8IYW2 2715 aa11.1□□□□□ -0.63
PDLIM1-205ENST00000493949 ASXL3Q9C0F0 2248 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ATG2BQ96BY7 2078 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 KIF26AQ9ULI4 1882 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 WDR64B1ANS9 1081 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 E9PMD0 336 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 RIPK2O43353 540 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 AKAP3O75969 853 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ITGA4P13612 1032 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 CCNB1P14635 433 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ITIH2P19823 946 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 MPLP40238 635 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DNA2P51530 1060 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ATP11AP98196 1134 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 BNIP1Q12981 228 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 TRADDQ15628 312 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 CNGA2Q16280 664 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SLC5A9Q2M3M2 681 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 PARP6Q2NL67 630 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DCAF17Q5H9S7 520 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DGKKQ5KSL6 1271 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SH3PXD2AQ5TCZ1 1133 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DAB2IPQ5VWQ8 1189 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 ARHGEF18Q6ZSZ5 1173 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 SFR1Q86XK3 245 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 PROSER1Q86XN7 944 aa11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDLIM1-205ENST00000493949 RHPN2Q8IUC4 686 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms