RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 HS6ST2Q96MM7 605 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 FAM118BQ9BPY3 351 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 MAGEB5Q9BZ81 275 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 STARD7Q9NQZ5 370 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 KLHL13Q9P2N7 655 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 GOLGA3Q08378 1498 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 TTBK1Q5TCY1 1321 aaPredicted RBP4.4□□□□□ -1.71
CD46-217ENST00000493796 TNIKQ9UKE5 1360 aa4.4□□□□□ -1.71
CD46-217ENST00000493796 KIF13AQ9H1H9 1805 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 ANO9A1A5B4 782 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 KCNU1A8MYU2 1149 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 CLIC1O00299 241 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 TP73O15350 636 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 CA12O43570 354 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 PRAMEF2O60811 474 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 COQ9O75208 318 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 YY1P25490 414 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 GPS1Q13098 491 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 ZNF268Q14587 947 aaPredicted RBP4.39□□□□□ -1.71
CD46-217ENST00000493796 MFSD13AQ14CX5 517 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 HSP90AB2PQ58FF8 381 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 FAXCQ5TGI0 409 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 LRCH2Q5VUJ6 765 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 PAPD7Q5XG87 772 aaKnown RBP4.39□□□□□ -1.71
CD46-217ENST00000493796 C11orf87Q6NUJ2 197 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 KSR2Q6VAB6 950 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 RANBP10Q6VN20 620 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 KIAA0408Q6ZU52 694 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 C11orf96Q7Z7L8 435 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 CNGA4Q8IV77 575 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 CCDC150Q8NCX0 1101 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 CCDC136Q96JN2 1154 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 WDR24Q96S15 920 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 USP29Q9HBJ7 922 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 VPS45Q9NRW7 570 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 TMOD4Q9NZQ9 345 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 FZD4Q9ULV1 537 aa4.39□□□□□ -1.71
CD46-217ENST00000493796 CEP162Q5TB80 1403 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 NUP153P49790 1475 aaKnown RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 CDK13Q14004 1512 aaKnown RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 E5RJQ4 531 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 FCHO1O14526 889 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 DSCR3O14972 297 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 FYB1O15117 783 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 CCNT2O60583 730 aaKnown RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 CBFA2T3O75081 653 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 RNF8O76064 485 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 MYL3P08590 195 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 ATP5F1P24539 256 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 MST1P26927 711 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 GABRB3P28472 473 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 SLC5A2P31639 672 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 PBX1P40424 430 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 TM4SF4P48230 202 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 DGKQP52824 942 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 DNASE1L3Q13609 305 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 PMS2P11Q13670 270 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 SEC23BQ15437 767 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 ETFDHQ16134 617 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 AASDHQ4L235 1098 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 MRNIPQ6NTE8 343 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 HIBCHQ6NVY1 386 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 DPP9Q86TI2 863 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 P3H2Q8IVL5 708 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 CCDC28AQ8IWP9 274 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 FAM71DQ8N9W8 422 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 OSR1Q8TAX0 266 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 ABHD5Q8WTS1 349 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 SCARB1Q8WTV0 552 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 MAP4K1Q92918 833 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 PRR11Q96HE9 360 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 HIC2Q96JB3 615 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 SNX27Q96L92 541 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 GDF15Q99988 308 aa4.38□□□□□ -1.71
CD46-217ENST00000493796 CINPQ9BW66 212 aaPredicted RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 PCF11O94913 1555 aaKnown RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 PPRC1Q5VV67 1664 aaKnown RBP4.38□□□□□ -1.71
CD46-217ENST00000493796 ATP10BO94823 1461 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 ZCCHC11Q5TAX3 1644 aaKnown RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 NCK2O43639 380 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 CAND2O75155 1236 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 TOP3BO95985 862 aaKnown RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 MBPP02686 304 aaPredicted RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 TMIGD3P0DMS9 266 aaPredicted RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 TNFSF4P23510 183 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 GALNSP34059 522 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 CCDC15Q0P6D6 951 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 HNRNPA0Q13151 305 aaKnown RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 SLC14A1Q13336 389 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 KCNJ12Q14500 433 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 ARL13BQ3SXY8 428 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.37□□□□□ -1.71
CD46-217ENST00000493796 TMTC4Q5T4D3 741 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 RAP1GAP2Q684P5 730 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 KRT73Q86Y46 540 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 DENND1AQ8TEH3 1009 aa4.37□□□□□ -1.71
CD46-217ENST00000493796 BRI3BPQ8WY22 251 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms