RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ZNF600Q6ZNG1 722 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TRMT10CQ7L0Y3 403 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 PRPF39Q86UA1 669 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CDH24Q86UP0 819 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 NEDD1Q8NHV4 660 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 LRRC20Q8TCA0 184 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SNX19Q92543 992 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 RMND5BQ96G75 393 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TRPV6Q9H1D0 765 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MAGEE1Q9HCI5 957 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ZDHHC18Q9NUE0 388 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TEKT2Q9UIF3 430 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 XDHP47989 1333 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 A0A1B0GTW7 788 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SMIM22K7EJ46 135 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 hCG_2039718K7EN88 272 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 GPAA1O43292 621 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 NMT2O60551 498 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SULT1C4O75897 302 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MAP3K6O95382 1288 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MYL2P10916 166 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 IFI30P13284 250 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SOX11P35716 441 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 STAT3P40763 770 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 LIFRP42702 1097 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TOB1P50616 345 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 DHX34Q14147 1143 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC14Q49A88 953 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 IGFN1Q86VF2 1251 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SIX6OS1Q8N1H7 587 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 CADM2Q8N3J6 435 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TTC13Q8NBP0 860 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF75CPQ92670 426 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 SGF29Q96ES7 293 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 C1orf74Q96LT6 269 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ERGIC2Q96RQ1 377 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TM9SF2Q99805 663 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TMEM109Q9BVC6 243 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 LSM14BQ9BX40 385 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 TSSK1BQ9BXA7 367 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF696Q9H7X3 374 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 QTRT2Q9H974 415 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.08□□□□□ -1.283e-6■■■■■ 29.3
VPS13B-205ENST00000493587 ANKMY1Q9P2S6 941 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ANAPC5Q9UJX4 755 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MINPP1Q9UNW1 487 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MYRFQ9Y2G1 1151 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 MTO1Q9Y2Z2 717 aaKnown RBP7.08□□□□□ -1.28
VPS13B-205ENST00000493587 UGT2A1Q9Y4X1 527 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 PLIN4Q96Q06 1357 aa7.08□□□□□ -1.28
VPS13B-205ENST00000493587 ARHGEF37A1IGU5 675 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PRR23AA6NEV1 266 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF213O14771 459 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 POLR1CO15160 346 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CCNKO75909 580 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 EIF2AK2P19525 551 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 EEF1B2P24534 225 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 BCAMP50895 628 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ATXN3P54252 364 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PTENP60484 403 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SLC25A3Q00325 362 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CDK16Q00536 496 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 HSPA14Q0VDF9 509 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 GALNT1Q10472 559 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SLC18A3Q16572 532 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PDK4Q16654 411 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 FGD3Q5JSP0 725 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 DHRS4L2Q6PKH6 230 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 METTL3Q86U44 580 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CCDC103Q8IW40 242 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PPM1KQ8N3J5 372 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SLAIN1Q8ND83 568 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 GRK7Q8WTQ7 553 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 P2RX5Q93086 422 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PTCD3Q96EY7 689 aaKnown RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 MCRS1Q96EZ8 462 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 C9orf72Q96LT7 481 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TTC25Q96NG3 672 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 EMILIN2Q9BXX0 1053 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 FRMD8Q9BZ67 464 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TXLNGYQ9BZA5 131 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 NMUR2Q9GZQ4 415 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 HIPK3Q9H422 1215 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 VPS45Q9NRW7 570 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 TOR4AQ9NXH8 423 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 AP3M1Q9Y2T2 418 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CORINQ9Y5Q5 1042 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 LRRC72A6NJI9 287 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 PODXLO00592 558 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 HOXC11O43248 304 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 AP1G1O43747 822 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 SPOPO43791 374 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 DEAF1O75398 565 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 CALB1P05937 261 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 GSTM1P09488 218 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ZNF182P17025 639 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-205ENST00000493587 NAGAP17050 411 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 M6PRP20645 277 aa7.07□□□□□ -1.28
VPS13B-205ENST00000493587 ITGALP20701 1170 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms