RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PROZ	P22891	400 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	PAX3	P23760	479 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	NXPH1	P58417	271 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	USP46	P62068	366 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	PPP2R3A	Q06190	1150 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	KRT32	Q14532	448 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	PDIA5	Q14554	519 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	C9orf57	Q5W0N0	161 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	RSRC2	Q7L4I2	434 aa	Known RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	SPATA2L	Q8IUW3	424 aa	Predicted RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	RASEF	Q8IZ41	740 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC25A45	Q8N413	288 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	EFCAB3	Q8N7B9	438 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	OR2T3	Q8NH03	318 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	MARVELD3	Q96A59	401 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	ERVMER34-1	Q9H9K5	563 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	EBF2	Q9HAK2	575 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	PLEKHA5	Q9HAU0	1116 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	SGK2	Q9HBY8	427 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	ABCB6	Q9NP58	842 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	THAP10	Q9P2Z0	257 aa	Predicted RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	SEL1L	Q9UBV2	794 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	LRWD1	Q9UFC0	647 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	GTF3C4	Q9UKN8	822 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	PCDHA4	Q9UN74	947 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	RP1L1	Q8IWN7	2480 aa	Predicted RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	CIT	O14578	2027 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	ANAPC1	Q9H1A4	1944 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	CCDC187	A0A096LP49	1063 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	TTC26	A0AVF1	554 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	ARHGAP10	A1A4S6	786 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	LACTBL1	A8MY62	500 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PIR	O00625	290 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	NPC1	O15118	1278 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	HNRNPR	O43390	633 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	LZTS3	O60299	673 aa	Predicted RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	BAG4	O95429	457 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	OAS1	P00973	400 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	DNTT	P04053	509 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	CISD3	P0C7P0	127 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PRR29	P0C7W0	189 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	IRF1	P10914	325 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	CYP11B2	P19099	503 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	ACO1	P21399	889 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PRKCH	P24723	683 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	ACAT1	P24752	427 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	MATR3	P43243	847 aa	Known RBP eCLIP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PPP3CC	P48454	512 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	KLRB1	Q12918	225 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	ENPP2	Q13822	863 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	ZNF234	Q14588	700 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	NECTIN1	Q15223	517 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC45A4	Q5BKX6	768 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SPATA1	Q5VX52	437 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	CREB3L3	Q68CJ9	461 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	CRTC1	Q6UUV9	634 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	RBM44	Q6ZP01	1051 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	DENND5B	Q6ZUT9	1274 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SV2A	Q7L0J3	742 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SPATS2	Q86XZ4	545 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SLFN12	Q8IYM2	578 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	BLID	Q8IZY5	108 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC34A3	Q8N130	599 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	GALNT11	Q8NCW6	608 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	OR4C6	Q8NH72	309 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	IFI44	Q8TCB0	444 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PDCD6IP	Q8WUM4	868 aa	Known RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	LEO1	Q8WVC0	666 aa	Predicted RBP	5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	UCMA	Q8WVF2	138 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	BHMT	Q93088	406 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	FAM212A	Q96EL1	285 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	APOLD1	Q96LR9	279 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	ESYT1	Q9BSJ8	1104 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	CYLD	Q9NQC7	956 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PLK2	Q9NYY3	685 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	WDR35	Q9P2L0	1181 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PCDHB11	Q9Y5F2	797 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	PCDHGA7	Q9Y5G6	932 aa		5.71	□□□□□ -1.5
SEC13-219	ENST00000492602	SDK2	Q58EX2	2172 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TP53BP1	Q12888	1972 aa	Predicted RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ARHGEF35	A5YM69	484 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602		M0R2N6	131 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	PLD2	O14939	933 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TOM1L1	O75674	476 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	NEFL	P07196	543 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ALPPL2	P10696	532 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	GCFC2	P16383	781 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TAF6	P49848	677 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	PEX3	P56589	373 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	IFRD2	Q12894	506 aa	Predicted RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	CCDC142	Q17RM4	750 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	GEN1	Q17RS7	908 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	TTC31	Q49AM3	519 aa	Predicted RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	CFAP221	Q4G0U5	840 aa		5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	INTS6L	Q5JSJ4	861 aa	Known RBP	5.7	□□□□□ -1.5
SEC13-219	ENST00000492602	NCEH1	Q6PIU2	408 aa		5.7	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms