RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CSGALNACT1Q8TDX6 532 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CLEC4CQ8WTT0 213 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 MS4A14Q96JA4 679 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 CYP2S1Q96SQ9 504 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 DDX50Q9BQ39 737 aaKnown RBP4.65□□□□□ -1.66
TRA2B-215ENST00000492417 TKTL2Q9H0I9 626 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 SDCBP2Q9H190 292 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 PTPRHQ9HD43 1115 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 VCX3AQ9NNX9 186 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 GKN1Q9NS71 199 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 LMCD1Q9NZU5 365 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 VPS28Q9UK41 221 aa4.65□□□□□ -1.66
TRA2B-215ENST00000492417 BRWD1Q9NSI6 2320 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CITO14578 2027 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TRIP12Q14669 1992 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PABPN1LA6NDY0 278 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ZNF185O15231 689 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 RNF40O75150 1001 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CNPP09543 421 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 COL6A1P12109 1028 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ATP5DP30049 168 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CCR1P32246 355 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 WASP42768 502 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ASPAP45381 313 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 RASSF2P50749 326 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 EPHB4P54760 987 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CCZ1BP86790 482 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CCZ1P86791 482 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 SLC7A5Q01650 507 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PIGHQ14442 188 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PCSK7Q16549 785 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 POM121L1PQ3SYA9 428 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PTPN20Q4JDL3 420 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ATP13A4Q4VNC1 1196 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 COBLL1Q53SF7 1204 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 SCARA3Q6AZY7 606 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 SLFN11Q7Z7L1 901 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CFAP52Q8N1V2 620 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TTC9BQ8N6N2 239 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 MAIP1Q8WWC4 291 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 RMDN1Q96DB5 314 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 RBM41Q96IZ5 413 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PCDHB18PQ96TA0 734 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CEP41Q9BYV8 373 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 DDX47Q9H0S4 455 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 KCNF1Q9H3M0 494 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 POPDC2Q9HBU9 364 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CFAP97Q9P2B7 532 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 UVRAGQ9P2Y5 699 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CDC23Q9UJX2 597 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 FARP1Q9Y4F1 1045 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 YIPF1Q9Y548 306 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 MRFAP1Q9Y605 127 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 A0A0U1RQJ8 604 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PGRMC1O00264 195 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PPFIA2O75334 1257 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TJP3O95049 919 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ATP1A1P05023 1023 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TMEM253P0C7T8 217 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 HOXD8P13378 290 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 EPCAMP16422 314 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PTPN2P17706 415 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TYMPP19971 482 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 KCNJ1P48048 391 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 GYS2P54840 703 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TSTA3Q13630 321 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 NAA30Q147X3 362 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 HEATR6Q6AI08 1181 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 TTC19Q6DKK2 380 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 COLGALT2Q8IYK4 626 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CMTR2Q8IYT2 770 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ARMC2Q8NEN0 867 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 JOSD2Q8TAC2 188 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ZNF461Q8TAF7 563 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 LNX1Q8TBB1 728 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 SKA2Q8WVK7 121 aaPredicted RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 CASD1Q96PB1 797 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 PPP1R10Q96QC0 940 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 DNAJC7Q99615 494 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 ELAC1Q9H777 363 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 VPS37BQ9H9H4 285 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 HAUS2Q9NVX0 235 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 THG1LQ9NWX6 298 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 IRAK4Q9NWZ3 460 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 AIPL1Q9NZN9 384 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 USP18Q9UMW8 372 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 NDRG2Q9UN36 371 aaKnown RBP4.65□□□□□ -1.67
TRA2B-215ENST00000492417 AP4E1Q9UPM8 1137 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 USH1CQ9Y6N9 552 aa4.65□□□□□ -1.67
TRA2B-215ENST00000492417 URB1O60287 2271 aaKnown RBP4.64□□□□□ -1.67
TRA2B-215ENST00000492417 CARNS1A5YM72 827 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 HIDE1A8MVS5 230 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 INPPL1O15357 1258 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 TBC1D4O60343 1298 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 DGKIO75912 1065 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 NOL4O94818 638 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 GZMAP12544 262 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 TUBP50607 506 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 ERVFC1P60507 584 aa4.64□□□□□ -1.67
TRA2B-215ENST00000492417 ADAM17P78536 824 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms