RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SLCO1B1Q9Y6L6 691 aa9.36□□□□□ -0.91
HDAC3-211ENST00000491581 TMEM131Q92545 1883 aa9.36□□□□□ -0.91
HDAC3-211ENST00000491581 NYNRINQ9P2P1 1898 aaKnown RBP9.36□□□□□ -0.91
HDAC3-211ENST00000491581 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 SLC12A8A0AV02 714 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 YJEFN3A6XGL0 299 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 E7ENQ6 273 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CETN3O15182 167 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CACNG3O60359 315 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 EPB41P11171 864 aaKnown RBP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 HLA-EP13747 358 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 LCP1P13796 627 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CD19P15391 556 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 BRD2P25440 801 aaKnown RBP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 RPL13P26373 211 aaKnown RBP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 TNFRSF4P43489 277 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 YWHAGP61981 247 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 ADIGQ0VDE8 80 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CUL2Q13617 745 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 ELF2Q15723 593 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 EDRF1Q3B7T1 1238 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 USP39Q53GS9 565 aaKnown RBP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 BTBD8Q5XKL5 378 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 IL31Q6EBC2 164 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 GJB7Q6PEY0 223 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 RRAGAQ7L523 313 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CCDC186Q7Z3E2 898 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CHPFQ8IZ52 775 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 WFDC5Q8TCV5 224 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 SMARCE1Q969G3 411 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CCDC47Q96A33 483 aaKnown RBP9.35□□□□□ -0.91
HDAC3-211ENST00000491581 MED15Q96RN5 788 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 VPS45Q9NRW7 570 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 CTNND2Q9UQB3 1225 aa9.35□□□□□ -0.91
HDAC3-211ENST00000491581 TP53BP1Q12888 1972 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-211ENST00000491581 IGHV1OR15-9A0A0B4J2B8 117 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 KCNJ18B7U540 433 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 MAP3K13O43283 966 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 RHOBTB1O94844 696 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 KCNK5O95279 499 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 PRKCHP24723 683 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 NTSR1P30989 418 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 EIF2DP41214 584 aaKnown RBP9.34□□□□□ -0.91
HDAC3-211ENST00000491581 IL12RB1P42701 662 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 FMO5P49326 533 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 DGKGP49619 791 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 MFAP3P55082 362 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 MCCD1P59942 119 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-211ENST00000491581 FAM193AP78312 1265 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 TRIM61Q5EBN2 209 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 RAB41Q5JT25 222 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 EOGTQ5NDL2 527 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 ARHGAP17Q68EM7 881 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 TTI2Q6NXR4 508 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 DEFB124Q8NES8 71 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 LMO3Q8TAP4 145 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 SPATA20Q8TB22 786 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 IPO4Q8TEX9 1081 aaKnown RBP9.34□□□□□ -0.91
HDAC3-211ENST00000491581 CYB5D2Q8WUJ1 264 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 MS4A3Q96HJ5 214 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 LOXL4Q96JB6 756 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 COMMD8Q9NX08 183 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 MARCH2Q9P0N8 246 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 TJP2Q9UDY2 1190 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 AJAP1Q9UKB5 411 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-211ENST00000491581 PLXNA2O75051 1894 aa9.34□□□□□ -0.91
HDAC3-211ENST00000491581 NCOR2Q9Y618 2525 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 CKAP5Q14008 2032 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 O00370 1275 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 ENGP17813 658 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 SLC6A4P31645 630 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 GTF2H1P32780 548 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 PLA2G4AP47712 749 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 PITX1P78337 314 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-211ENST00000491581 RPL6Q02878 288 aaKnown RBP9.33□□□□□ -0.92
HDAC3-211ENST00000491581 FUT11Q495W5 492 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 SH3PXD2AQ5TCZ1 1133 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 PMF1Q6P1K2 205 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 RFWD3Q6PCD5 774 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 TMEM270Q6UE05 265 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 KIAA1324Q6UXG2 1013 aaKnown RBP9.33□□□□□ -0.92
HDAC3-211ENST00000491581 RSRC2Q7L4I2 434 aaKnown RBP9.33□□□□□ -0.92
HDAC3-211ENST00000491581 FMNL3Q8IVF7 1028 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 ANKRD52Q8NB46 1076 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 ADAM32Q8TC27 787 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 NELFBQ8WX92 580 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 OTUB2Q96DC9 234 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 MRGPRX1Q96LB2 322 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 KREMEN1Q96MU8 473 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 CAMK1GQ96NX5 476 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 LSM14BQ9BX40 385 aaKnown RBP9.33□□□□□ -0.92
HDAC3-211ENST00000491581 MKRN2Q9H000 416 aaKnown RBP9.33□□□□□ -0.92
HDAC3-211ENST00000491581 MIS12Q9H081 205 aa9.33□□□□□ -0.92
HDAC3-211ENST00000491581 POLMQ9NP87 494 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms