RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 TULP2O00295 520 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 CISD3P0C7P0 127 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 NDUFV2P19404 249 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 PMLP29590 882 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
COL6A3-211ENST00000491233 NOVA1P51513 510 aaKnown RBP14.31□□□□□ -0.12
COL6A3-211ENST00000491233 TKTL1P51854 596 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 BCAT1P54687 386 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 SLC8A3P57103 927 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
COL6A3-211ENST00000491233 IRX4P78413 519 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 COG7P83436 770 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 LRRC63Q05C16 580 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 TRIM61Q5EBN2 209 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 RAB41Q5JT25 222 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 DAB2IPQ5VWQ8 1189 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 LYSMD4Q5XG99 296 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 SDE2Q6IQ49 451 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 PSAPL1Q6NUJ1 521 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 KIAA1211LQ6NV74 962 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 ANKRD52Q8NB46 1076 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 ENGASEQ8NFI3 743 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 IPO4Q8TEX9 1081 aaKnown RBP14.31□□□□□ -0.12
COL6A3-211ENST00000491233 SLC35C1Q96A29 364 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 GABRG3Q99928 467 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 ULBP1Q9BZM6 244 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 UBXN6Q9BZV1 441 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 CD248Q9HCU0 757 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 CACNA2D2Q9NY47 1150 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 MARCH2Q9P0N8 246 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 ARMCX3Q9UH62 379 aaPredicted RBP14.31□□□□□ -0.12
COL6A3-211ENST00000491233 EVLQ9UI08 416 aaPredicted RBP14.31□□□□□ -0.12
COL6A3-211ENST00000491233 STRIP2Q9ULQ0 834 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 ZNF510Q9Y2H8 683 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 PCDH15Q96QU1 1955 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 CKAP5Q14008 2032 aa14.31□□□□□ -0.12
COL6A3-211ENST00000491233 SLC12A8A0AV02 714 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 XPO1O14980 1071 aaKnown RBP14.3□□□□□ -0.12
COL6A3-211ENST00000491233 ZBTB24O43167 697 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-211ENST00000491233 PENKP01210 267 aaPredicted RBP14.3□□□□□ -0.12
COL6A3-211ENST00000491233 CD19P15391 556 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 YWHAEP62258 255 aaKnown RBP14.3□□□□□ -0.12
COL6A3-211ENST00000491233 RPL6Q02878 288 aaKnown RBP14.3□□□□□ -0.12
COL6A3-211ENST00000491233 PDE4CQ08493 712 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 LRMPQ12912 555 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 BECN1Q14457 450 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 SGO2Q562F6 1265 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 FYB2Q5VWT5 728 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 BHLHA9Q7RTU4 235 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 SYT12Q8IV01 421 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 DEFB119Q8N690 84 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 UBR7Q8N806 425 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 SPATA20Q8TB22 786 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 NDRG1Q92597 394 aaKnown RBP14.3□□□□□ -0.12
COL6A3-211ENST00000491233 DCLK3Q9C098 648 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 TMEM74BQ9NUR3 256 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 HESX1Q9UBX0 185 aa14.3□□□□□ -0.12
COL6A3-211ENST00000491233 MUC22E2RYF6 1773 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 IGHV1OR15-9A0A0B4J2B8 117 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 CDX4O14627 284 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 AP5Z1O43299 807 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 ZBED1O96006 694 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 ITPKAP23677 461 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 CHKAP35790 457 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 DPP6P42658 865 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 MAPK8P45983 427 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 MFAP3P55082 362 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 NUCB2P80303 420 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 BST2Q10589 180 aaKnown RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 GEN1Q17RS7 908 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 UAP1L1Q3KQV9 507 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 SPDYCQ5MJ68 293 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 PEAR1Q5VY43 1037 aaPredicted RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 SLC36A4Q6YBV0 504 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 DENND1CQ8IV53 801 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 PLD4Q96BZ4 506 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 TIGD1Q96MW7 591 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 NUSAP1Q9BXS6 441 aaKnown RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 SLC6A17Q9H1V8 727 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 CD93Q9NPY3 652 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 HOOK1Q9UJC3 728 aaKnown RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 FBXO10Q9UK96 956 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 ANGPTL2Q9UKU9 493 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 AGO1Q9UL18 857 aaKnown RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 CYP8B1Q9UNU6 501 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 SLC27A6Q9Y2P4 619 aa14.29□□□□□ -0.12
COL6A3-211ENST00000491233 TPRP12270 2363 aaKnown RBP14.29□□□□□ -0.12
COL6A3-211ENST00000491233 WASH3PC4AMC7 463 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 O00370 1275 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 GFRA2O00451 464 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 PSMA7O14818 248 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 GIPC1O14908 333 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 ZNF217O75362 1048 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 CYBBP04839 570 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 CFIP05156 583 aa14.28□□□□□ -0.12
COL6A3-211ENST00000491233 TBXAS1P24557 533 aaPredicted RBP14.28□□□□□ -0.12
COL6A3-211ENST00000491233 FMO5P49326 533 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms