RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 GRM6O15303 877 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 LILRB3O75022 631 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 VNN2O95498 520 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 GSTA1P08263 222 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 CHKAP35790 457 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 ARPP19P56211 112 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 NOMO3P69849 1222 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 POF1BQ8WVV4 589 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 DYDC1Q8WWB3 177 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 ARHGEF2Q92974 986 aaKnown RBP23.7■■□□□ 1.38
USF3-203ENST00000491165 TRIM7Q9C029 511 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 DCLK3Q9C098 648 aa23.7■■□□□ 1.38
USF3-203ENST00000491165 CARNS1A5YM72 827 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 ATF2P15336 505 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 RRM1P23921 792 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 IVDP26440 423 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 GPD2P43304 727 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 ITGA8P53708 1063 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 ERVK-21P61565 698 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 HNRNPABQ99729 332 aaKnown RBP23.69■■□□□ 1.38
USF3-203ENST00000491165 TJP2Q9UDY2 1190 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 WDR27A2RRH5 827 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 EPOPA6NHQ4 379 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 TTC4O95801 387 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 RDXP35241 583 aaKnown RBP23.69■■□□□ 1.38
USF3-203ENST00000491165 TSPY1Q01534 308 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 PPP2R2DQ66LE6 453 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 SLC8B1Q6J4K2 584 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 TTC9BQ8N6N2 239 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 CRISPLD1Q9H336 500 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 SLC12A4Q9UP95 1085 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 RWDD3Q9Y3V2 267 aa23.69■■□□□ 1.38
USF3-203ENST00000491165 MED7O43513 233 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 URODP06132 367 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 CTSAP10619 480 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 OR1D2P34982 312 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 IRS1P35568 1242 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 NSFP46459 744 aaKnown RBP23.68■■□□□ 1.38
USF3-203ENST00000491165 CENPCQ03188 943 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 RNF19BQ6ZMZ0 732 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 ATL2Q8NHH9 583 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 KCNK16Q96T55 309 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 HERPUD2Q9BSE4 406 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 PRUNE2Q8WUY3 3088 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 BDNFP23560 247 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 ROR1Q01973 937 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 PDE4CQ08493 712 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 PTP4A2Q12974 167 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 TRIP13Q15645 432 aaPredicted RBP23.68■■□□□ 1.38
USF3-203ENST00000491165 TRPM8Q7Z2W7 1104 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 FAM35AQ86V20 835 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 ATAD1Q8NBU5 361 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 TCF25Q9BQ70 676 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.68■■□□□ 1.381e-5■□□□□ 8.9
USF3-203ENST00000491165 ANAPC5Q9UJX4 755 aa23.68■■□□□ 1.38
USF3-203ENST00000491165 TMEM120BA0PK00 339 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 OR6C75A6NL08 312 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 HIDE1A8MVS5 230 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 CPB1P15086 417 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 CDH5P33151 784 aaPredicted RBP23.67■■□□□ 1.38
USF3-203ENST00000491165 ADCY8P40145 1251 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 SF3A3Q12874 501 aaKnown RBP eCLIP23.67■■□□□ 1.38
USF3-203ENST00000491165 CLEC20AQ6ZU45 233 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 ZMIZ2Q8NF64 920 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 LHX5Q9H2C1 402 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 KRT82Q9NSB4 513 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 MSRAQ9UJ68 235 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 BACE2Q9Y5Z0 518 aa23.67■■□□□ 1.38
USF3-203ENST00000491165 H7C4K7 107 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 GABBR2O75899 941 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 PROSCO94903 275 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 CYP2F1P24903 491 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 PLXNA3P51805 1871 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 RAB30Q15771 203 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 PMF1Q6P1K2 205 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 LLGL2Q6P1M3 1020 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 TMC7Q7Z402 723 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 PHLDB2Q86SQ0 1253 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 ANKRD52Q8NB46 1076 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 MGARPQ8TDB4 240 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 MED10Q9BTT4 135 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 C11orf84Q9BUA3 381 aaPredicted RBP23.66■■□□□ 1.38
USF3-203ENST00000491165 MRPL17Q9NRX2 175 aaKnown RBP23.66■■□□□ 1.38
USF3-203ENST00000491165 ABI2Q9NYB9 513 aaPredicted RBP23.66■■□□□ 1.38
USF3-203ENST00000491165 COL4A4P53420 1690 aaPredicted RBP23.66■■□□□ 1.38
USF3-203ENST00000491165 SNX3O60493 162 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 GPR17Q13304 367 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 LRRC14Q15048 493 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 KYNUQ16719 465 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 VSTM1Q6UX27 236 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 MON1BQ7L1V2 547 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 SLC35F5Q8WV83 523 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 ARNTL2Q8WYA1 636 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 CPXM1Q96SM3 734 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 SMOQ99835 787 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 SLC28A3Q9HAS3 691 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 LZTS1Q9Y250 596 aa23.66■■□□□ 1.38
USF3-203ENST00000491165 R3HDM2Q9Y2K5 976 aaKnown RBP23.66■■□□□ 1.38
USF3-203ENST00000491165 MTMR11A4FU01 709 aa23.65■■□□□ 1.38
USF3-203ENST00000491165 H3BNC9 293 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms