RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 EXD3Q8N9H8 876 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 PDZD8Q8NEN9 1154 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 RFFLQ8WZ73 363 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 KCND2Q9NZV8 630 aa14.49□□□□□ -0.09
EXOSC3-207ENST00000490516 NBPF19A0A087WUL8 3843 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 VILLO15195 856 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 EPHX1P07099 455 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 MYF5P13349 255 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 GTF2BQ00403 316 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 POU5F1Q01860 360 aaKnown RBP14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 ZNF234Q14588 700 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 ME3Q16798 604 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 HYIQ5T013 277 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 LIMS2Q7Z4I7 341 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 NUP93Q8N1F7 819 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 SCAMP5Q8TAC9 235 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 CACTINQ8WUQ7 758 aaKnown RBP14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 OVCA2Q8WZ82 227 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 POMGNT1Q8WZA1 660 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 GTF3C6Q969F1 213 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 FIZ1Q96SL8 496 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 ACE2Q9BYF1 805 aaPredicted RBP14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 ZNF518BQ9C0D4 1074 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 NACA2Q9H009 215 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 LHX5Q9H2C1 402 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 FBXO10Q9UK96 956 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 ITGA11Q9UKX5 1188 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 ODF2LQ9ULJ1 636 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 NME7Q9Y5B8 376 aa14.48□□□□□ -0.09
EXOSC3-207ENST00000490516 K7ENP7 123 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 CLDN5O00501 218 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 FAM13AO94988 1023 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 MT-CO3P00414 261 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 WNT1P04628 370 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 CKMT2P17540 419 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 SCP2P22307 547 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 PGFP49763 221 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 TUBP50607 506 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 MFAP3P55082 362 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 GABREP78334 506 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 RBP5P82980 135 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 BNIP3Q12983 259 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 ILKQ13418 452 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 SNX30Q5VWJ9 437 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 INO80CQ6PI98 192 aaPredicted RBP14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 ATG14Q6ZNE5 492 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 DPH6Q7L8W6 267 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 SORCS1Q8WY21 1168 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 SLC6A18Q96N87 628 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 FAM213AQ9BRX8 229 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 KLF16Q9BXK1 252 aaPredicted RBP14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 DPH1Q9BZG8 443 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 PARVGQ9HBI0 331 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 ADAMTS1Q9UHI8 967 aa14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 UTP20O75691 2785 aaKnown RBP14.47□□□□□ -0.09
EXOSC3-207ENST00000490516 NPC1O15118 1278 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 RTN3O95197 1032 aaPredicted RBP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 TBX18O95935 607 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 IGHV4-34P06331 123 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 WARSP23381 471 aaKnown RBP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 EPHA8P29322 1005 aaPredicted RBP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 ZNF131P52739 623 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 BCAT1P54687 386 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 RACK1P63244 317 aaKnown RBP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 DHX8Q14562 1220 aaKnown RBP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 GPBP1Q86WP2 473 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 BRSK2Q8IWQ3 736 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 OR2T3Q8NH03 318 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 UCMAQ8WVF2 138 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 SAAL1Q96ER3 474 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 KCNK16Q96T55 309 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 MTMR12Q9C0I1 747 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 BTBD1Q9H0C5 482 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 FOXP1Q9H334 677 aaPredicted RBP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 DPEP3Q9H4B8 488 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 ZHX3Q9H4I2 956 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 SSUH2Q9Y2M2 353 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 SLC27A6Q9Y2P4 619 aa14.46□□□□□ -0.09
EXOSC3-207ENST00000490516 LRRK2Q5S007 2527 aa14.46□□□□□ -0.1
EXOSC3-207ENST00000490516 DXOO77932 396 aaKnown RBP14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 ZDHHC11BP0C7U3 371 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 TOB1P50616 345 aaPredicted RBP14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 UBAP2LQ14157 1087 aaKnown RBP14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 DTHD1Q6ZMT9 781 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 HPDLQ96IR7 371 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 VCPIP1Q96JH7 1222 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 MRPL45Q9BRJ2 306 aaKnown RBP14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 B3GNT5Q9BYG0 378 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 ELOVL4Q9GZR5 314 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 ASCL3Q9NQ33 180 aa14.45□□□□□ -0.1
EXOSC3-207ENST00000490516 NOTCH2Q04721 2471 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 SUV39H1O43463 412 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 TLR5O60602 858 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 PTPN1P18031 435 aaKnown RBP14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 ACP1P24666 158 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 TRAPPC10P48553 1259 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 ERVPABLB-1P60509 514 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 TMEM119Q4V9L6 283 aa14.44□□□□□ -0.1
EXOSC3-207ENST00000490516 C4orf17Q53FE4 359 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms