RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 PRPF40AO75400 957 aaKnown RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 TOM1L1O75674 476 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 DEXIO95424 95 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 BAG4O95429 457 aaKnown RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 IGLV3-19P01714 112 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ADRB2P07550 413 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 MYF5P13349 255 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ITGB6P18564 788 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 PAX3P23760 479 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 CYP2F1P24903 491 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 CTSKP43235 329 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 RIPPLY3P57055 190 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 IL9RQ01113 521 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 CCDC142Q17RM4 750 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 INAVAQ3KP66 663 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 SPATA1Q5VX52 437 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 C9orf57Q5W0N0 161 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 WSCD1Q658N2 575 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 INO80CQ6PI98 192 aaPredicted RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 LAYNQ6UX15 382 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 KIAA1324Q6UXG2 1013 aaKnown RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 Q6ZUG5 572 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 PIK3AP1Q6ZUJ8 805 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 DHX40Q8IX18 779 aaKnown RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 CHPFQ8IZ52 775 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 DAW1Q8N136 415 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 FBXL16Q8N461 479 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 NAT16Q8N8M0 369 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 LEO1Q8WVC0 666 aaPredicted RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 KIFAP3Q92845 792 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 CNDP2Q96KP4 475 aaKnown RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ZNF578Q96N58 590 aaPredicted RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 MTMR9Q96QG7 549 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 PKMYT1Q99640 499 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 NAP1L4Q99733 375 aaKnown RBP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ESYT1Q9BSJ8 1104 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 TCHPQ9BT92 498 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 CCSER1Q9C0I3 900 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 RNF38Q9H0F5 515 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 TUFT1Q9NNX1 390 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 OSGEPQ9NPF4 335 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ANO2Q9NQ90 1003 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 TPSG1Q9NRR2 321 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 DEC1Q9P2X7 70 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 DSEQ9UL01 958 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 ANKRD6Q9Y2G4 727 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 PAXBP1Q9Y5B6 917 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 APCP25054 2843 aa7.62□□□□□ -1.19
PDLIM1-203ENST00000490391 A0A1B0GTQ1 180 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 ARHGEF35A5YM69 484 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 LACTBL1A8MY62 500 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 WASH3PC4AMC7 463 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 PRRT4C9JH25 899 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 KLK10O43240 276 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 FAM189A1O60320 539 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 CLTAP09496 248 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 PFKLP17858 780 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 GLDCP23378 1020 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 GRIA4P48058 902 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 PDE6CP51160 858 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 TPMTP51580 245 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 PEX3P56589 373 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 EVCP57679 992 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 RPL10AP62906 217 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 CCT2P78371 535 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 GAD2Q05329 585 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 MCL1Q07820 350 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 SHBQ15464 509 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 ENOX2Q16206 610 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 NFE2Q16621 373 aaPredicted RBP7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 LINC00303Q3SY05 128 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 FUT11Q495W5 492 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 RNF20Q5VTR2 975 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 HIST2H2BCQ6DN03 193 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 GATAD2AQ86YP4 633 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 DCP1BQ8IZD4 617 aaKnown RBP7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 KCNE4Q8WWG9 221 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 ORAI3Q9BRQ5 295 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 DPH1Q9BZG8 443 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 TM9SF3Q9HD45 589 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 ABCB6Q9NP58 842 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 ASCL3Q9NQ33 180 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 CFAP97Q9P2B7 532 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 ATXN7L1Q9ULK2 861 aaPredicted RBP7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 CLCA2Q9UQC9 943 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 PCDHB1Q9Y5F3 818 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 CPQQ9Y646 472 aa7.61□□□□□ -1.19
PDLIM1-203ENST00000490391 SPG11Q96JI7 2443 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 NAV3Q8IVL0 2385 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 CCDC169A6NNP5 214 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 GFRA2O00451 464 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 CYB561D2O14569 222 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 XPOTO43592 962 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 LDOC1O95751 146 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 OAS1P00973 400 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 POU3F2P20265 443 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 PDIA3P30101 505 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 GRIK1P39086 918 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 TXKP42681 527 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms