RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 PDZD3Q86UT5 571 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 OR2I1PQ8NGU4 316 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 IPO4Q8TEX9 1081 aaKnown RBP12.38□□□□□ -0.43
ACTN4-206ENST00000489451 BHMTQ93088 406 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 ARID3AQ99856 593 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 NT5C1AQ9BXI3 368 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 NIF3L1Q9GZT8 377 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 NACA2Q9H009 215 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 CYP3A43Q9HB55 503 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 CAPN10Q9HC96 672 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 PLK2Q9NYY3 685 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 PCDHA5Q9Y5H7 936 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 NAV2Q8IVL1 2488 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 CKAP5Q14008 2032 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 ITPR1Q14643 2758 aa12.38□□□□□ -0.43
ACTN4-206ENST00000489451 DMXL2Q8TDJ6 3036 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 PENKP01210 267 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-206ENST00000489451 MYL1P05976 194 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 CEACAM1P13688 526 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 SYKP43405 635 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 MAPK8P45983 427 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 UAP1L1Q3KQV9 507 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 ZNF394Q53GI3 561 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 FYB2Q5VWT5 728 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 INTS8Q75QN2 995 aaKnown RBP12.37□□□□□ -0.43
ACTN4-206ENST00000489451 CCDC186Q7Z3E2 898 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 LURAP1LQ8IV03 231 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-206ENST00000489451 PGBD3Q8N328 593 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 SLC4A11Q8NBS3 891 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 RBBP8NLQ8NC74 664 aaPredicted RBP12.37□□□□□ -0.43
ACTN4-206ENST00000489451 ADAM32Q8TC27 787 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 EEF2KMTQ96G04 330 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 MRGPRX1Q96LB2 322 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 SCNM1Q9BWG6 230 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 DUSP16Q9BY84 665 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 MMRN2Q9H8L6 949 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 USP25Q9UHP3 1055 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 LOC400499M0QZD8 3231 aa12.37□□□□□ -0.43
ACTN4-206ENST00000489451 FREM2Q5SZK8 3169 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
ACTN4-206ENST00000489451 TULP2O00295 520 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 MAP3K13O43283 966 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 RAD23BP54727 409 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 FAM193AP78312 1265 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 RPL6Q02878 288 aaKnown RBP12.36□□□□□ -0.43
ACTN4-206ENST00000489451 ZNF33AQ06730 810 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 ENPEPQ07075 957 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 SEMA3BQ13214 749 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 GEN1Q17RS7 908 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 C19orf48Q6RUI8 117 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 KRBA2Q6ZNG9 492 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 TRMT11Q7Z4G4 463 aaKnown RBP12.36□□□□□ -0.43
ACTN4-206ENST00000489451 FAM186BQ8IYM0 893 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 CHPFQ8IZ52 775 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 GUF1Q8N442 669 aaKnown RBP12.36□□□□□ -0.43
ACTN4-206ENST00000489451 ZNF276Q8N554 614 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 SPATA32Q96LK8 384 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 SCAND2PQ9GZW5 306 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-206ENST00000489451 TMEM8AQ9HCN3 771 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 DNMT3LQ9UJW3 386 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 NAGPAQ9UK23 515 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 CYP8B1Q9UNU6 501 aa12.36□□□□□ -0.43
ACTN4-206ENST00000489451 PLA2G4AP47712 749 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 DGKGP49619 791 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 MFAP3P55082 362 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 LMAN2Q12907 356 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 ENPP2Q13822 863 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 CBWD6Q4V339 395 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 RAB41Q5JT25 222 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 CBWD3Q5JTY5 395 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 CBWD5Q5RIA9 395 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 C10orf120Q5SQS8 335 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 TMEM215Q68D42 235 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 NDRG1Q92597 394 aaKnown RBP12.35□□□□□ -0.43
ACTN4-206ENST00000489451 TATDN2Q93075 761 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
ACTN4-206ENST00000489451 NUSAP1Q9BXS6 441 aaKnown RBP12.35□□□□□ -0.43
ACTN4-206ENST00000489451 CLIC5Q9NZA1 410 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 RASAL2Q9UJF2 1139 aa12.35□□□□□ -0.43
ACTN4-206ENST00000489451 LSM7Q9UK45 103 aaKnown RBP12.35□□□□□ -0.43
ACTN4-206ENST00000489451 AGO1Q9UL18 857 aaKnown RBP12.35□□□□□ -0.43
ACTN4-206ENST00000489451 SPAARA0A1B0GVQ0 90 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 UPK3BL1B0FP48 263 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 UPK3BL2E5RIL1 263 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 AP5Z1O43299 807 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 GJB3O75712 270 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 CFIP05156 583 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 CD59P13987 128 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 CORO1AP31146 461 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 HOXD12P35452 270 aa12.34□□□□□ -0.43
ACTN4-206ENST00000489451 PSMC2P35998 433 aaKnown RBP12.34□□□□□ -0.43
ACTN4-206ENST00000489451 IL12RB1P42701 662 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms