RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SCUBE3Q8IX30 993 aa14.86□□□□□ -0.03
COL9A2-208ENST00000488463 SUMF1Q8NBK3 374 aa14.86□□□□□ -0.03
COL9A2-208ENST00000488463 USP33Q8TEY7 942 aa14.86□□□□□ -0.03
COL9A2-208ENST00000488463 PNKPQ96T60 521 aa14.86□□□□□ -0.03
COL9A2-208ENST00000488463 LSM14BQ9BX40 385 aaKnown RBP14.86□□□□□ -0.03
COL9A2-208ENST00000488463 FAM126AQ9BYI3 521 aaPredicted RBP14.86□□□□□ -0.03
COL9A2-208ENST00000488463 OLA1Q9NTK5 396 aaKnown RBP14.86□□□□□ -0.03
COL9A2-208ENST00000488463 LSM7Q9UK45 103 aaKnown RBP14.86□□□□□ -0.03
COL9A2-208ENST00000488463 FBXO10Q9UK96 956 aa14.86□□□□□ -0.03
COL9A2-208ENST00000488463 AGO1Q9UL18 857 aaKnown RBP14.86□□□□□ -0.03
COL9A2-208ENST00000488463 SPAG17Q6Q759 2223 aa14.86□□□□□ -0.03
COL9A2-208ENST00000488463 SLC12A8A0AV02 714 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 E5RJQ4 531 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 EPHB6O15197 1021 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 MED7O43513 233 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 CACNG3O60359 315 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 KAT7O95251 611 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 IGLV3-27P01718 113 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 LTFP02788 710 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 HMBSP08397 361 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 CORO1AP31146 461 aaKnown RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 USP8P40818 1118 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 KIR2DL1P43626 348 aaPredicted RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 COPB1P53618 953 aaKnown RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 GOLGA8FQ08AF8 430 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 GOLGA8DPQ0D2H9 430 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 PDCLQ13371 301 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 ANO6Q4KMQ2 910 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 RSRC2Q7L4I2 434 aaKnown RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 RPLP0P6Q8NHW5 317 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 DDX1Q92499 740 aaKnown RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 NKD2Q969F2 451 aaPredicted RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 EXOC4Q96A65 974 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 PIWIL1Q96J94 861 aaKnown RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 CPXM1Q96SM3 734 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 BPIFA3Q9BQP9 254 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 MIS12Q9H081 205 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 LHX5Q9H2C1 402 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 SEMA4AQ9H3S1 761 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 SFMBT1Q9UHJ3 866 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 STOML2Q9UJZ1 356 aa14.85□□□□□ -0.03
COL9A2-208ENST00000488463 HBS1LQ9Y450 684 aaKnown RBP14.85□□□□□ -0.03
COL9A2-208ENST00000488463 F8VZ95 297 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 MSI1O43347 362 aaKnown RBP14.84□□□□□ -0.03
COL9A2-208ENST00000488463 PENKP01210 267 aaPredicted RBP14.84□□□□□ -0.03
COL9A2-208ENST00000488463 CISD3P0C7P0 127 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 ATP1A3P13637 1013 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 GRIA2P42262 883 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 ACADSBP45954 432 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 PTK2Q05397 1052 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 KLHL40Q2TBA0 621 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 FYB2Q5VWT5 728 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 ZC3H14Q6PJT7 736 aaKnown RBP14.84□□□□□ -0.03
COL9A2-208ENST00000488463 TPGS1Q6ZTW0 290 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 BEND5Q7L4P6 421 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 SYT13Q7L8C5 426 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 DHX40Q8IX18 779 aaKnown RBP14.84□□□□□ -0.03
COL9A2-208ENST00000488463 AOPEPQ8N6M6 819 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 NAT16Q8N8M0 369 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 PLD4Q96BZ4 506 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 STK33Q9BYT3 514 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 ARHGEF4Q9NR80 690 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 ST7Q9NRC1 585 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 STRIP2Q9ULQ0 834 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 ZNF510Q9Y2H8 683 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 CACNA1AO00555 2505 aa14.84□□□□□ -0.03
COL9A2-208ENST00000488463 LGALS16A8MUM7 142 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 PES1O00541 588 aaKnown RBP14.83□□□□□ -0.04
COL9A2-208ENST00000488463 ATG13O75143 517 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 IGLV3-25P01717 112 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 TYRP14679 529 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 HNRNPLP14866 589 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL9A2-208ENST00000488463 PTMSP20962 102 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 CDH5P33151 784 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-208ENST00000488463 JAM2P57087 298 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 KDSRQ06136 332 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 EIF4EBP2Q13542 120 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-208ENST00000488463 RAPGEF1Q13905 1077 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 TAF5Q15542 800 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 ANO4Q32M45 955 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 EMC10Q5UCC4 262 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 SYPL2Q5VXT5 272 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 DENND1CQ8IV53 801 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 PASD1Q8IV76 773 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 CPXM2Q8N436 756 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 TERB1Q8NA31 727 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 IL17RCQ8NAC3 791 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 DQX1Q8TE96 717 aaKnown RBP14.83□□□□□ -0.04
COL9A2-208ENST00000488463 RNF139Q8WU17 664 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 SLC39A13Q96H72 371 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 BBS2Q9BXC9 721 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 EPC1Q9H2F5 836 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 WDR35Q9P2L0 1181 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 NAALADL1Q9UQQ1 740 aa14.83□□□□□ -0.04
COL9A2-208ENST00000488463 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.82□□□□□ -0.04
COL9A2-208ENST00000488463 NEDD8-MDP1E9PL57 170 aa14.82□□□□□ -0.04
COL9A2-208ENST00000488463 HRO43593 1189 aa14.82□□□□□ -0.04
COL9A2-208ENST00000488463 LMNAP02545 664 aaKnown RBP14.82□□□□□ -0.04
COL9A2-208ENST00000488463 APODP05090 189 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms