RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 NELFCDQ8IXH7 590 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 GPR65Q8IYL9 337 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 UBALD2Q8IYN6 164 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 SYCP3Q8IZU3 236 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF655Q8N720 491 aaPredicted RBP6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ATAD1Q8NBU5 361 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ADCY4Q8NFM4 1077 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 BEST2Q8NFU1 509 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 OR10T2Q8NGX3 314 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF461Q8TAF7 563 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 HDAC7Q8WUI4 952 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 SENP8Q96LD8 212 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 ZSWIM3Q96MP5 696 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 PYM1Q9BRP8 204 aaKnown RBP6.37□□□□□ -1.39
CDHR3-213ENST00000488386 STRA6Q9BX79 667 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 PLEKHA5Q9HAU0 1116 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 CEP72Q9P209 647 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 EPS15L1Q9UBC2 864 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 APEX2Q9UBZ4 518 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 DPP7Q9UHL4 492 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 CDH7Q9ULB5 785 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 PCDHA7Q9UN72 937 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 CTNND2Q9UQB3 1225 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 MRPS23Q9Y3D9 190 aaKnown RBP6.37□□□□□ -1.39
CDHR3-213ENST00000488386 INSL5Q9Y5Q6 135 aa6.37□□□□□ -1.39
CDHR3-213ENST00000488386 PTPRJQ12913 1337 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TMEM82A0PJX8 343 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 FRMD3A2A2Y4 597 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 MTMR11A4FU01 709 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ANHXE9PGG2 379 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 H7C4K7 107 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 M0QZQ0 153 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 PIRO00625 290 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 CYB561D2O14569 222 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 CLIC2O15247 247 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 POLR2DO15514 142 aaKnown RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 KLF4O43474 513 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 PPP6R2O75170 966 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 MOSPD3O75425 235 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 PAPLNO95428 1278 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 DCNP07585 359 aaKnown RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 SYPP08247 313 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 KRT19P08727 400 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 HNRNPA1P09651 372 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ATF2P15336 505 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 CYP3A5P20815 502 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ACAT1P24752 427 aaKnown RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 HOXD13P35453 343 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 AARSP49588 968 aaKnown RBP eCLIP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 GPR15P49685 360 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 MRE11P49959 708 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 IRAK1P51617 712 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 LILRA4P59901 499 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TFAMQ00059 246 aaKnown RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 DUSP4Q13115 394 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 CUL4BQ13620 913 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TEAD2Q15562 447 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 STXBP5Q5T5C0 1151 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 SDHAF4Q5VUM1 108 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 WSCD1Q658N2 575 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TANGO2Q6ICL3 276 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 PDXDC1Q6P996 788 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 USP37Q86T82 979 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 LRRTM3Q86VH5 581 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF513Q8N8E2 541 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 APPL2Q8NEU8 664 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ATOH1Q92858 354 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF396Q96N95 335 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ACCSQ96QU6 501 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 RTP3Q9BQQ7 232 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 LGR4Q9BXB1 951 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TRIM9Q9C026 710 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ST6GALNAC4Q9H4F1 302 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TBC1D17Q9HA65 648 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 PDE11AQ9HCR9 933 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF334Q9HCZ1 680 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 DPP3Q9NY33 737 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 PRR13Q9NZ81 148 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 IGSF9Q9P2J2 1179 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 KCNG1Q9UIX4 513 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TCFL5Q9UL49 500 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ZNF281Q9Y2X9 895 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 ZDHHC9Q9Y397 364 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 MTF2Q9Y483 593 aaPredicted RBP6.36□□□□□ -1.39
CDHR3-213ENST00000488386 YIPF1Q9Y548 306 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 FHOD1Q9Y613 1164 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 STYXL1Q9Y6J8 313 aa6.36□□□□□ -1.39
CDHR3-213ENST00000488386 TICRRQ7Z2Z1 1910 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 MUC6Q6W4X9 2439 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ZDBF2Q9HCK1 2354 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 A0A1B0GVL5 298 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ANO9A1A5B4 782 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ARHGEF37A1IGU5 675 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 XPOTO43592 962 aaKnown RBP6.35□□□□□ -1.39
CDHR3-213ENST00000488386 CUTAO60888 179 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 YEATS4O95619 227 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ITGB3P05106 788 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ADRB2P07550 413 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ZGLP1P0C6A0 271 aa6.35□□□□□ -1.39
CDHR3-213ENST00000488386 ODC1P11926 461 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms