RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 GPD2P43304 727 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 C10orf76Q5T2E6 689 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 RBM43Q6ZSC3 357 aaKnown RBP24.8■■□□□ 1.56
RNF38-208ENST00000488058 NUDT18Q6ZVK8 323 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 CAMKK1Q8N5S9 505 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 ALLCQ8N6M5 410 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 TSTD1Q8NFU3 115 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 IRGQQ8WZA9 623 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 SHC3Q92529 594 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 TAB2Q9NYJ8 693 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 MARK1Q9P0L2 795 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 GMEB2Q9UKD1 530 aa24.8■■□□□ 1.56
RNF38-208ENST00000488058 AGO1Q9UL18 857 aaKnown RBP24.8■■□□□ 1.56
RNF38-208ENST00000488058 MYO15AQ9UKN7 3530 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 MSI1O43347 362 aaKnown RBP24.79■■□□□ 1.56
RNF38-208ENST00000488058 CACNG3O60359 315 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 FBXO21O94952 628 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 APBB3O95704 486 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 LTFP02788 710 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 CHKAP35790 457 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 TNFRSF4P43489 277 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 TCP11X2Q5H9J9 407 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 KIAA2013Q8IYS2 634 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 TERB1Q8NA31 727 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 TXNDC5Q8NBS9 432 aaKnown RBP24.79■■□□□ 1.56
RNF38-208ENST00000488058 ENOX1Q8TC92 643 aaKnown RBP24.79■■□□□ 1.56
RNF38-208ENST00000488058 MMP17Q9ULZ9 603 aa24.79■■□□□ 1.56
RNF38-208ENST00000488058 VPS13AQ96RL7 3174 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 AXIN1O15169 862 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 PNMA6AP0CW24 399 aaPredicted RBP24.78■■□□□ 1.56
RNF38-208ENST00000488058 EEF1GP26641 437 aaKnown RBP24.78■■□□□ 1.56
RNF38-208ENST00000488058 ACADSBP45954 432 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 HARS2P49590 506 aaKnown RBP24.78■■□□□ 1.56
RNF38-208ENST00000488058 C11orf57Q6ZUT1 292 aaPredicted RBP24.78■■□□□ 1.56
RNF38-208ENST00000488058 ARHGAP30Q7Z6I6 1101 aaPredicted RBP24.78■■□□□ 1.56
RNF38-208ENST00000488058 SCUBE3Q8IX30 993 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 FAM149B1Q96BN6 582 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 ANO10Q9NW15 660 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 HBS1LQ9Y450 684 aaKnown RBP24.78■■□□□ 1.56
RNF38-208ENST00000488058 USP34Q70CQ2 3546 aa24.78■■□□□ 1.56
RNF38-208ENST00000488058 A0A0A0MRY4 1105 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 KIR2DL1P43626 348 aaPredicted RBP24.77■■□□□ 1.56
RNF38-208ENST00000488058 DGKGP49619 791 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 DGKEP52429 567 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 PTK2Q05397 1052 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 RAPGEF1Q13905 1077 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 TRIP4Q15650 581 aaPredicted RBP24.77■■□□□ 1.56
RNF38-208ENST00000488058 STX1AQ16623 288 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 CCDC183Q5T5S1 534 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 PASD1Q8IV76 773 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 ZNF513Q8N8E2 541 aaPredicted RBP24.77■■□□□ 1.56
RNF38-208ENST00000488058 IL17RCQ8NAC3 791 aa24.77■■□□□ 1.56
RNF38-208ENST00000488058 LSM14BQ9BX40 385 aaKnown RBP24.77■■□□□ 1.56
RNF38-208ENST00000488058 FAM186AA6NE01 2351 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 EML5Q05BV3 1969 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 CCDC163A0A0D9SF12 145 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 SGK1O00141 431 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 RPP40O75818 363 aaKnown RBP24.76■■□□□ 1.55
RNF38-208ENST00000488058 CYBBP04839 570 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 NCAM1P13591 858 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 KCNMA1Q12791 1236 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 CRY1Q16526 586 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 EOGTQ5NDL2 527 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 LAIR1Q6GTX8 287 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 ANO7Q6IWH7 933 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 MSANTD2Q6P1R3 559 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 TOGARAM2Q6ZUX3 1019 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 GAB3Q8WWW8 586 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 VPS16Q9H269 839 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 CYTH4Q9UIA0 394 aa24.76■■□□□ 1.55
RNF38-208ENST00000488058 E5RJQ4 531 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 FOXN3O00409 490 aaPredicted RBP24.75■■□□□ 1.55
RNF38-208ENST00000488058 SART1O43290 800 aaKnown RBP24.75■■□□□ 1.55
RNF38-208ENST00000488058 TPM2P07951 284 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 MEA1Q16626 185 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 DDI1Q8WTU0 396 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 STK32AQ8WU08 396 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 SLC4A5Q9BY07 1137 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 TPSD1Q9BZJ3 242 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 FANCLQ9NW38 375 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 FHOD1Q9Y613 1164 aa24.75■■□□□ 1.55
RNF38-208ENST00000488058 TSPAN3O60637 253 aa24.74■■□□□ 1.55
RNF38-208ENST00000488058 WASP42768 502 aa24.74■■□□□ 1.55
RNF38-208ENST00000488058 RPL34P49207 117 aaKnown RBP24.74■■□□□ 1.55
RNF38-208ENST00000488058 HSF5Q4G112 596 aaPredicted RBP24.74■■□□□ 1.55
RNF38-208ENST00000488058 FYB2Q5VWT5 728 aa24.74■■□□□ 1.55
RNF38-208ENST00000488058 TMEM92Q6UXU6 159 aa24.74■■□□□ 1.55
RNF38-208ENST00000488058 CPXM2Q8N436 756 aa24.74■■□□□ 1.55
RNF38-208ENST00000488058 P2RY11Q96G91 374 aa24.74■■□□□ 1.55
RNF38-208ENST00000488058 PTPRZ1P23471 2315 aaPredicted RBP24.74■■□□□ 1.55
RNF38-208ENST00000488058 RIF1Q5UIP0 2472 aaKnown RBP24.73■■□□□ 1.55
RNF38-208ENST00000488058 CAPN9O14815 690 aa24.73■■□□□ 1.55
RNF38-208ENST00000488058 PENKP01210 267 aaPredicted RBP24.73■■□□□ 1.55
RNF38-208ENST00000488058 CHRM1P11229 460 aaPredicted RBP24.73■■□□□ 1.55
RNF38-208ENST00000488058 HNRNPLP14866 589 aaKnown RBP eCLIP24.73■■□□□ 1.55
RNF38-208ENST00000488058 KRT9P35527 623 aa24.73■■□□□ 1.55
RNF38-208ENST00000488058 TBX4P57082 545 aa24.73■■□□□ 1.55
RNF38-208ENST00000488058 PDCLQ13371 301 aa24.73■■□□□ 1.55
RNF38-208ENST00000488058 DRAP1Q14919 205 aaPredicted RBP24.73■■□□□ 1.55
RNF38-208ENST00000488058 KRT31Q15323 416 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms