RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 CA14Q9ULX7 337 aa4.72□□□□□ -1.65
TTC3-220ENST00000487711 VPS4AQ9UN37 437 aa4.72□□□□□ -1.65
TTC3-220ENST00000487711 PCDHB2Q9Y5E7 798 aa4.72□□□□□ -1.65
TTC3-220ENST00000487711 J3KTA2 159 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 PIP5K1BO14986 540 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 RNF8O76064 485 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 MPGP29372 298 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 RAE1P78406 368 aaKnown RBP4.71□□□□□ -1.66
TTC3-220ENST00000487711 FOXF2Q12947 444 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 SEMA3BQ13214 749 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 GGT6Q6P531 493 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 C1orf228Q6PIY5 440 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 RANBP10Q6VN20 620 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 ZNF66Q6ZN08 573 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 C16orf71Q8IYS4 520 aaPredicted RBP4.71□□□□□ -1.66
TTC3-220ENST00000487711 C8orf58Q8NAV2 365 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 SH2D3AQ9BRG2 576 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 NUDT22Q9BRQ3 303 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 EFHD1Q9BUP0 239 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 TTLL2Q9BWV7 592 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 ADGRE3Q9BY15 652 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 SEMA4CQ9C0C4 833 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 EPS8L2Q9H6S3 715 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 HELLSQ9NRZ9 838 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 GAR1Q9NY12 217 aaKnown RBP4.71□□□□□ -1.66
TTC3-220ENST00000487711 FZD4Q9ULV1 537 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 DAAM1Q9Y4D1 1078 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 DTNAQ9Y4J8 743 aa4.71□□□□□ -1.66
TTC3-220ENST00000487711 PNMA6EA0A0J9YXQ4 647 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 H3BNC9 293 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 PPP6CO00743 305 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 FFAR2O15552 330 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 LATS1O95835 1130 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 GLP2RO95838 553 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 TUBB4AP04350 444 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 CELA2AP08217 269 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 EPHB2P29323 1055 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 JAK3P52333 1124 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 ZNF268Q14587 947 aaPredicted RBP4.7□□□□□ -1.66
TTC3-220ENST00000487711 SRSF7Q16629 238 aaKnown RBP eCLIP4.7□□□□□ -1.66
TTC3-220ENST00000487711 CEP78Q5JTW2 689 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 FAM90A2PQ658T7 463 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 CCDC144NLQ6NUI1 221 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 MIS18BP1Q6P0N0 1132 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 KRT27Q7Z3Y8 459 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 SRRM1Q8IYB3 904 aaKnown RBP4.7□□□□□ -1.66
TTC3-220ENST00000487711 CLASRPQ8N2M8 674 aaKnown RBP4.7□□□□□ -1.66
TTC3-220ENST00000487711 SAMD3Q8N6K7 520 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 ZNF527Q8NB42 609 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 HIC2Q96JB3 615 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 PRPF18Q99633 342 aaKnown RBP4.7□□□□□ -1.66
TTC3-220ENST00000487711 TMEM8AQ9HCN3 771 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 MAFFQ9ULX9 164 aa4.7□□□□□ -1.66
TTC3-220ENST00000487711 ABHD14A-ACY1A0A1B0GW23 586 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 CGB1A6NKQ9 187 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 NTSR2O95665 410 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 SLC3A2P08195 630 aaKnown RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 MMP8P22894 467 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 IGHMBP2P38935 993 aaKnown RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 IL6STP40189 918 aaPredicted RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 ABCG1P45844 678 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 WDR5P61964 334 aaKnown RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 TNFAIP2Q03169 654 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 SLC14A1Q13336 389 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 OS9Q13438 667 aaPredicted RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 CSHL1Q14406 222 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 EZH2Q15910 746 aaKnown RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 PFKFB3Q16875 520 aaPredicted RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 COLEC12Q5KU26 742 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 PGBD2Q6P3X8 592 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 PIK3AP1Q6ZUJ8 805 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 GATAD2AQ86YP4 633 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 CNGA4Q8IV77 575 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 VPS37AQ8NEZ2 397 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 OVCA2Q8WZ82 227 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 WDR12Q9GZL7 423 aaKnown RBP4.69□□□□□ -1.66
TTC3-220ENST00000487711 PLCB1Q9NQ66 1216 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 PDGFCQ9NRA1 345 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 WDR17Q8IZU2 1322 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 PCSK5Q92824 1860 aa4.69□□□□□ -1.66
TTC3-220ENST00000487711 A0A087WV62 115 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 GOLGA6L3A6NEY3 463 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 AQP12BA6NM10 295 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 PCDH17O14917 1159 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 MBPP02686 304 aaPredicted RBP4.68□□□□□ -1.66
TTC3-220ENST00000487711 PRR35P0CG20 571 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 ALADP13716 330 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 NPPBP16860 134 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 ARHGAP25P42331 645 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 ALDH18A1P54886 795 aaKnown RBP4.68□□□□□ -1.66
TTC3-220ENST00000487711 RHBDL3P58872 404 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 CNGA3Q16281 694 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 SLC18B1Q6NT16 456 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 ZNF813Q6ZN06 617 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 YTHDF3Q7Z739 585 aaKnown RBP4.68□□□□□ -1.66
TTC3-220ENST00000487711 PNISRQ8TF01 805 aaKnown RBP4.68□□□□□ -1.66
TTC3-220ENST00000487711 SLC39A13Q96H72 371 aa4.68□□□□□ -1.66
TTC3-220ENST00000487711 KAZALD1Q96I82 304 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms