RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 KCNJ11Q14654 390 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 FAM102BQ5T8I3 360 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 ITPRIPL1Q6GPH6 555 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 POTEAQ6S8J7 498 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 BBS12Q6ZW61 710 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 TMEM126BQ8IUX1 230 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 TMEM161BQ8NDZ6 487 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 KBTBD7Q8WVZ9 684 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 COX4I2Q96KJ9 171 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 FAM213AQ9BRX8 229 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 HAUS8Q9BT25 410 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 INO80BQ9C086 356 aaPredicted RBP11□□□□□ -0.65
CCDC171-208ENST00000486641 KLC2Q9H0B6 622 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 HOMER2Q9NSB8 354 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 DNAJC28Q9NX36 388 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 DOLKQ9UPQ8 538 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
CCDC171-208ENST00000486641 HTR3EA5X5Y0 456 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 WDR46O15213 610 aaKnown RBP10.99□□□□□ -0.65
CCDC171-208ENST00000486641 ZBTB14O43829 449 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 KRT38O76015 456 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 HLA-DRAP01903 254 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 NELFEP18615 380 aaKnown RBP10.99□□□□□ -0.65
CCDC171-208ENST00000486641 PRKCHP24723 683 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 IL1R2P27930 398 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 ARRB2P32121 409 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 GJA8P48165 433 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 YWHAZP63104 245 aaKnown RBP10.99□□□□□ -0.65
CCDC171-208ENST00000486641 NFIAQ12857 509 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 PIGHQ14442 188 aaPredicted RBP10.99□□□□□ -0.65
CCDC171-208ENST00000486641 DNAJC24Q6P3W2 148 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 USP37Q86T82 979 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 MAP4K3Q8IVH8 894 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 SORT1Q99523 831 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 RTKNQ9BST9 563 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 APOBEC3GQ9HC16 384 aaKnown RBP10.99□□□□□ -0.65
CCDC171-208ENST00000486641 TBC1D22BQ9NU19 505 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 SELENONQ9NZV5 590 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 ZC3H7BQ9UGR2 993 aaKnown RBP10.99□□□□□ -0.65
CCDC171-208ENST00000486641 EFR3BQ9Y2G0 817 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 HEY1Q9Y5J3 304 aa10.99□□□□□ -0.65
CCDC171-208ENST00000486641 FBP2O00757 339 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 KCNQ2O43526 872 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 PSMC3P17980 439 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 KDELR1P24390 212 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 RXRGP48443 463 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 HSPA13P48723 471 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 NDST2P52849 883 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 WNT7BP56706 349 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 NUP107P57740 925 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 CUL2Q13617 745 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 GPD1LQ8N335 351 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 ARFGAP1Q8N6T3 406 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF606Q8WXB4 792 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 FAF2Q96CS3 445 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 VPS50Q96JG6 964 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 HNRNPABQ99729 332 aaKnown RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 FRMD8P1Q9BZ68 369 aaPredicted RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 DHX33Q9H6R0 707 aaKnown RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 POPDC2Q9HBU9 364 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 NARFQ9UHQ1 456 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 EMCNQ9ULC0 261 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 PRR12Q9ULL5 1215 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 FUOMA2VDF0 154 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 C7orf72A4D263 438 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 TRDMT1O14717 391 aaKnown RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 AIM2O14862 343 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 ZBED1O96006 694 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 CAPNS1P04632 268 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 XRCC1P18887 633 aaPredicted RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 GABRB2P47870 512 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 NPTX2P47972 431 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 STAT2P52630 851 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 ATXN3P54252 364 aaPredicted RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 MS4A2Q01362 244 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 SLC25A11Q02978 314 aaKnown RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 KLF10Q13118 480 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 FLOT2Q14254 428 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 PPP6R3Q5H9R7 873 aaPredicted RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 TDRD10Q5VZ19 366 aaKnown RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 CDC42EP5Q6NZY7 148 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 TMEM53Q6P2H8 277 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 RFX6Q8HWS3 928 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 CHERPQ8IWX8 916 aaKnown RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 APBB2Q92870 758 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 LENG8Q96PV6 779 aaPredicted RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 CDRT15Q96T59 188 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 CAAP1Q9H8G2 361 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 MAN1C1Q9NR34 630 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 SPATA7Q9P0W8 599 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 EPS15L1Q9UBC2 864 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 SLC9A2Q9UBY0 812 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 EBF1Q9UH73 591 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 GGA1Q9UJY5 639 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 COQ6Q9Y2Z9 468 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 STRCQ7RTU9 1775 aa10.98□□□□□ -0.65
CCDC171-208ENST00000486641 ZNF335Q9H4Z2 1342 aaPredicted RBP10.98□□□□□ -0.65
CCDC171-208ENST00000486641 ADAM23O75077 832 aa10.97□□□□□ -0.65
CCDC171-208ENST00000486641 H6PDO95479 791 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms