RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 KCNK5O95279 499 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 PENKP01210 267 aaPredicted RBP23.52■■□□□ 1.36
SREBF1-214ENST00000486311 PTGER3P43115 390 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 NUCB2P80303 420 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 PM20D1Q6GTS8 502 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 ERCC4Q92889 916 aaPredicted RBP23.52■■□□□ 1.36
SREBF1-214ENST00000486311 BHMTQ93088 406 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 SLC35C1Q96A29 364 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 PLK2Q9NYY3 685 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 CALCOCO1Q9P1Z2 691 aa23.52■■□□□ 1.36
SREBF1-214ENST00000486311 ARMCX3Q9UH62 379 aaPredicted RBP23.52■■□□□ 1.36
SREBF1-214ENST00000486311 CHD8Q9HCK8 2581 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 TRIM49BA6NDI0 452 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 PMLP29590 882 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 CORO1AP31146 461 aaKnown RBP23.51■■□□□ 1.35
SREBF1-214ENST00000486311 CHKAP35790 457 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 DPP6P42658 865 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 TKTL1P51854 596 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 YWHAGP61981 247 aaKnown RBP eCLIP23.51■■□□□ 1.35
SREBF1-214ENST00000486311 IRX4P78413 519 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 GOLGA7BQ2TAP0 167 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 DAB2IPQ5VWQ8 1189 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 FYB2Q5VWT5 728 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 LYSMD4Q5XG99 296 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 ARMCX6Q7L4S7 300 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 SYT12Q8IV01 421 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 IPO4Q8TEX9 1081 aaKnown RBP23.51■■□□□ 1.35
SREBF1-214ENST00000486311 TMEM9BQ9NQ34 198 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 MARCH2Q9P0N8 246 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 HOOK1Q9UJC3 728 aaKnown RBP23.51■■□□□ 1.35
SREBF1-214ENST00000486311 TSPAN16Q9UKR8 245 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 STRIP2Q9ULQ0 834 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 SLC27A6Q9Y2P4 619 aa23.51■■□□□ 1.35
SREBF1-214ENST00000486311 CACNA1BQ00975 2339 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 TULP2O00295 520 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 GFRA2O00451 464 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 CDX4O14627 284 aaPredicted RBP23.5■■□□□ 1.35
SREBF1-214ENST00000486311 XPO1O14980 1071 aaKnown RBP23.5■■□□□ 1.35
SREBF1-214ENST00000486311 ZBTB24O43167 697 aaPredicted RBP23.5■■□□□ 1.35
SREBF1-214ENST00000486311 KRT37O76014 449 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 ZBED1O96006 694 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 HMBSP08397 361 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 BCAT1P54687 386 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 YWHAEP62258 255 aaKnown RBP23.5■■□□□ 1.35
SREBF1-214ENST00000486311 PDE4CQ08493 712 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 SGO2Q562F6 1265 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 KIAA1211LQ6NV74 962 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 SLC36A4Q6YBV0 504 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 RSRC2Q7L4I2 434 aaKnown RBP23.5■■□□□ 1.35
SREBF1-214ENST00000486311 UBR7Q8N806 425 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 TMEM74BQ9NUR3 256 aa23.5■■□□□ 1.35
SREBF1-214ENST00000486311 AGO1Q9UL18 857 aaKnown RBP23.5■■□□□ 1.35
SREBF1-214ENST00000486311 AP5Z1O43299 807 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 NDUFV2P19404 249 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 TRIM61Q5EBN2 209 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 PEAR1Q5VY43 1037 aaPredicted RBP23.49■■□□□ 1.35
SREBF1-214ENST00000486311 BHLHA9Q7RTU4 235 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 ULBP1Q9BZM6 244 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 METTL14Q9HCE5 456 aaKnown RBP23.49■■□□□ 1.35
SREBF1-214ENST00000486311 CACNA2D2Q9NY47 1150 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 HESX1Q9UBX0 185 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 PILRBQ9UKJ0 227 aa23.49■■□□□ 1.35
SREBF1-214ENST00000486311 SLC12A8A0AV02 714 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 PSMA7O14818 248 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 ZNF217O75362 1048 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 CD19P15391 556 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 TBXAS1P24557 533 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-214ENST00000486311 HOXD12P35452 270 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 MFAP3P55082 362 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 RPL6Q02878 288 aaKnown RBP23.48■■□□□ 1.35
SREBF1-214ENST00000486311 BST2Q10589 180 aaKnown RBP23.48■■□□□ 1.35
SREBF1-214ENST00000486311 LMAN2Q12907 356 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 PSAPL1Q6NUJ1 521 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 DENND1CQ8IV53 801 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 ELOA2Q8IYF1 753 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-214ENST00000486311 CPXM2Q8N436 756 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 DHTKD1Q96HY7 919 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-214ENST00000486311 LRRC4Q9HBW1 653 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 ANGPTL2Q9UKU9 493 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 KIAA1257Q9ULG3 409 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 RAD54BQ9Y620 910 aa23.48■■□□□ 1.35
SREBF1-214ENST00000486311 MYH10P35580 1976 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 IGHV1OR15-9A0A0B4J2B8 117 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 PMM2O15305 246 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 VDRP11473 427 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 ITPKAP23677 461 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 FMO5P49326 533 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 NOVA1P51513 510 aaKnown RBP23.47■■□□□ 1.35
SREBF1-214ENST00000486311 SHC2P98077 582 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 LRMPQ12912 555 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 STIM1Q13586 685 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 SLC23A3Q6PIS1 610 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 FAM217AQ8IXS0 508 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 NDRG1Q92597 394 aaKnown RBP23.47■■□□□ 1.35
SREBF1-214ENST00000486311 PLD4Q96BZ4 506 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 CEP63Q96MT8 703 aa23.47■■□□□ 1.35
SREBF1-214ENST00000486311 NUSAP1Q9BXS6 441 aaKnown RBP23.47■■□□□ 1.35
SREBF1-214ENST00000486311 OLA1Q9NTK5 396 aaKnown RBP23.47■■□□□ 1.35
SREBF1-214ENST00000486311 O00370 1275 aa23.46■■□□□ 1.35
SREBF1-214ENST00000486311 NPC1O15118 1278 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms