RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 KPNA7A9QM74 516 aa8.79□□□□□ -1
XRN1-212ENST00000486211 CPLX1O14810 134 aa8.79□□□□□ -1
XRN1-212ENST00000486211 HCRTO43612 131 aa8.79□□□□□ -1
XRN1-212ENST00000486211 CACNG3O60359 315 aa8.79□□□□□ -1
XRN1-212ENST00000486211 DFNA5O60443 496 aa8.79□□□□□ -1
XRN1-212ENST00000486211 MPOP05164 745 aa8.79□□□□□ -1
XRN1-212ENST00000486211 ERVPABLB-1P60509 514 aa8.79□□□□□ -1
XRN1-212ENST00000486211 STRN3Q13033 797 aa8.79□□□□□ -1
XRN1-212ENST00000486211 ORC1Q13415 861 aa8.79□□□□□ -1
XRN1-212ENST00000486211 ENPP2Q13822 863 aa8.79□□□□□ -1
XRN1-212ENST00000486211 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
XRN1-212ENST00000486211 NUMA1Q14980 2115 aa8.79□□□□□ -1
XRN1-212ENST00000486211 TMEM132DQ14C87 1099 aa8.79□□□□□ -1
XRN1-212ENST00000486211 ANO4Q32M45 955 aa8.79□□□□□ -1
XRN1-212ENST00000486211 PRAMEF14Q5SWL7 426 aa8.79□□□□□ -1
XRN1-212ENST00000486211 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
XRN1-212ENST00000486211 VASH1Q7L8A9 365 aaPredicted RBP8.79□□□□□ -1
XRN1-212ENST00000486211 OSTM1Q86WC4 334 aa8.79□□□□□ -1
XRN1-212ENST00000486211 DDX42Q86XP3 938 aaKnown RBP eCLIP8.79□□□□□ -1
XRN1-212ENST00000486211 TMPRSS6Q8IU80 811 aa8.79□□□□□ -1
XRN1-212ENST00000486211 SCN4BQ8IWT1 228 aa8.79□□□□□ -1
XRN1-212ENST00000486211 MEIOBQ8N635 442 aa8.79□□□□□ -1
XRN1-212ENST00000486211 LRRN4Q8WUT4 740 aa8.79□□□□□ -1
XRN1-212ENST00000486211 WBP2Q969T9 261 aa8.79□□□□□ -1
XRN1-212ENST00000486211 FUBP3Q96I24 572 aaKnown RBP eCLIP8.79□□□□□ -1
XRN1-212ENST00000486211 RUSC1Q9BVN2 902 aa8.79□□□□□ -1
XRN1-212ENST00000486211 C17orf75Q9HAS0 396 aa8.79□□□□□ -1
XRN1-212ENST00000486211 DNAJC17Q9NVM6 304 aaKnown RBP8.79□□□□□ -1
XRN1-212ENST00000486211 DDX43Q9NXZ2 648 aaKnown RBP8.79□□□□□ -1
XRN1-212ENST00000486211 CPSF3Q9UKF6 684 aaKnown RBP8.79□□□□□ -1
XRN1-212ENST00000486211 L1RE1Q9UN81 338 aa8.79□□□□□ -1
XRN1-212ENST00000486211 DERAQ9Y315 318 aa8.79□□□□□ -1
XRN1-212ENST00000486211 STON1Q9Y6Q2 735 aa8.79□□□□□ -1
XRN1-212ENST00000486211 TLN1Q9Y490 2541 aaKnown RBP8.79□□□□□ -1
XRN1-212ENST00000486211 SFI1A8K8P3 1242 aa8.78□□□□□ -1
XRN1-212ENST00000486211 LAD1O00515 517 aa8.78□□□□□ -1
XRN1-212ENST00000486211 OGTO15294 1046 aa8.78□□□□□ -1
XRN1-212ENST00000486211 TSPAN3O60637 253 aa8.78□□□□□ -1
XRN1-212ENST00000486211 DTNBO60941 627 aa8.78□□□□□ -1
XRN1-212ENST00000486211 CISD3P0C7P0 127 aa8.78□□□□□ -1
XRN1-212ENST00000486211 MBL2P11226 248 aaPredicted RBP8.78□□□□□ -1
XRN1-212ENST00000486211 CDC25AP30304 524 aa8.78□□□□□ -1
XRN1-212ENST00000486211 ACSL1P33121 698 aa8.78□□□□□ -1
XRN1-212ENST00000486211 COPAP53621 1224 aa8.78□□□□□ -1
XRN1-212ENST00000486211 RIPPLY3P57055 190 aa8.78□□□□□ -1
XRN1-212ENST00000486211 TLE1Q04724 770 aa8.78□□□□□ -1
XRN1-212ENST00000486211 KYAT1Q16773 422 aa8.78□□□□□ -1
XRN1-212ENST00000486211 KDM7AQ6ZMT4 941 aa8.78□□□□□ -1
XRN1-212ENST00000486211 DENND5BQ6ZUT9 1274 aa8.78□□□□□ -1
XRN1-212ENST00000486211 C1orf186Q6ZWK4 172 aa8.78□□□□□ -1
XRN1-212ENST00000486211 SPATA2LQ8IUW3 424 aaPredicted RBP8.78□□□□□ -1
XRN1-212ENST00000486211 CD302Q8IX05 232 aa8.78□□□□□ -1
XRN1-212ENST00000486211 EID2Q8N6I1 236 aa8.78□□□□□ -1
XRN1-212ENST00000486211 ERMNQ8TAM6 284 aa8.78□□□□□ -1
XRN1-212ENST00000486211 SCFD1Q8WVM8 642 aa8.78□□□□□ -1
XRN1-212ENST00000486211 BIRC7Q96CA5 298 aa8.78□□□□□ -1
XRN1-212ENST00000486211 SIPA1Q96FS4 1042 aa8.78□□□□□ -1
XRN1-212ENST00000486211 VCPIP1Q96JH7 1222 aa8.78□□□□□ -1
XRN1-212ENST00000486211 CEP295NLQ96MC4 621 aa8.78□□□□□ -1
XRN1-212ENST00000486211 ELF4Q99607 663 aaPredicted RBP8.78□□□□□ -1
XRN1-212ENST00000486211 C1QTNF2Q9BXJ5 285 aa8.78□□□□□ -1
XRN1-212ENST00000486211 DPP3Q9NY33 737 aa8.78□□□□□ -1
XRN1-212ENST00000486211 C2CD2Q9Y426 696 aa8.78□□□□□ -1
XRN1-212ENST00000486211 SNX14Q9Y5W7 946 aa8.78□□□□□ -1
XRN1-212ENST00000486211 CKAP5Q14008 2032 aa8.78□□□□□ -1
XRN1-212ENST00000486211 FBN2P35556 2912 aa8.77□□□□□ -1
XRN1-212ENST00000486211 A0A0B4J269 797 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 VILLO15195 856 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 GREM1O60565 184 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 AP1G2O75843 785 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 MT-CO3P00414 261 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 ITGAVP06756 1048 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 CKMT2P17540 419 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 CD27P26842 260 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 KRT2P35908 639 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 MATR3P43243 847 aaKnown RBP eCLIP8.77□□□□□ -1.01
XRN1-212ENST00000486211 LSSP48449 732 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 PPP3CCP48454 512 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 ZNF132P52740 706 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 NOP14P78316 857 aaKnown RBP8.77□□□□□ -1.01
XRN1-212ENST00000486211 GABREP78334 506 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 STARD3Q14849 445 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 SV2CQ496J9 727 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 SFMBT2Q5VUG0 894 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 RINT1Q6NUQ1 792 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 FAM171BQ6P995 826 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 KANSL1Q7Z3B3 1105 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 FAM124AQ86V42 546 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 CACUL1Q86Y37 369 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 LSMEM2Q8N112 164 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 PRCCQ92733 491 aaPredicted RBP8.77□□□□□ -1.01
XRN1-212ENST00000486211 KCNN1Q92952 543 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 P2RY11Q96G91 374 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 ZNF274Q96GC6 653 aaPredicted RBP8.77□□□□□ -1.01
XRN1-212ENST00000486211 ADAMTS1Q9UHI8 967 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 FKBPLQ9UIM3 349 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 MAP4K5Q9Y4K4 846 aa8.77□□□□□ -1.01
XRN1-212ENST00000486211 ARID1BQ8NFD5 2236 aaPredicted RBP8.77□□□□□ -1.01
XRN1-212ENST00000486211 UTP20O75691 2785 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms