RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 R3HCC1Q9Y3T6 440 aaKnown RBP12.9□□□□□ -0.34
SSR4-210ENST00000485612 KCNJ18B7U540 433 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 WASH3PC4AMC7 463 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 GFRA2O00451 464 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 STX6O43752 255 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 NTRK1P04629 796 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 CDK4P11802 303 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 TNNI1P19237 187 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 ANXA13P27216 316 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 ACTN2P35609 894 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 CCT8P50990 548 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 AFF3P51826 1226 aaKnown RBP12.89□□□□□ -0.35
SSR4-210ENST00000485612 CYP24A1Q07973 514 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 SURF1Q15526 300 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 TEAD4Q15561 434 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 PKDCCQ504Y2 493 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 ZNF507Q8TCN5 953 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 CEP295NLQ96MC4 621 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 CGRRF1Q99675 332 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
SSR4-210ENST00000485612 ANKRD6Q9Y2G4 727 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 SH3BP1Q9Y3L3 701 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 MGAQ8IWI9 3026 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
SSR4-210ENST00000485612 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 TRIM66O15016 1216 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 SPTLC2O15270 562 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
SSR4-210ENST00000485612 BRINP1O60477 761 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 C1SP09871 688 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 PTPN1P18031 435 aaKnown RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 GNL1P36915 607 aaPredicted RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 CASP4P49662 377 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 TPMTP51580 245 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 TAF10Q12962 218 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 STARD3Q14849 445 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 PSMD6Q15008 389 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 MAPRE1Q15691 268 aaKnown RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 FUT11Q495W5 492 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 ARHGAP40Q5TG30 622 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 FOXD4L5Q5VV16 416 aaPredicted RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 SHC4Q6S5L8 630 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 OR6B3Q8NGW1 331 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 FOXD4L4Q8WXT5 416 aaPredicted RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 SNX19Q92543 992 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 IGSF8Q969P0 613 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 ZFRQ96KR1 1074 aaKnown RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 C8orf48Q96LL4 319 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 XPO6Q96QU8 1125 aaKnown RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 NUP58Q9BVL2 599 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
SSR4-210ENST00000485612 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 SNX25Q9H3E2 840 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 SMYD3Q9H7B4 428 aa12.88□□□□□ -0.35
SSR4-210ENST00000485612 H0Y8X5 98 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 ENC1O14682 589 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 TACC1O75410 805 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 RFPL3O75679 317 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 TMPRSS3P57727 454 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 MYL6P60660 151 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 NOP14P78316 857 aaKnown RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 IL9RQ01113 521 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 EHHADHQ08426 723 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 WDR72Q3MJ13 1102 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 FOXD4L6Q3SYB3 417 aaPredicted RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 COLEC12Q5KU26 742 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 HES3Q5TGS1 186 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 BROXQ5VW32 411 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 FOXD4L3Q6VB84 417 aaPredicted RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 ERICH1Q86X53 443 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 WBP2Q969T9 261 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 INTS4Q96HW7 963 aaKnown RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 SLITRK1Q96PX8 696 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 LGMNQ99538 433 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 XYLT2Q9H1B5 865 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 CPNE5Q9HCH3 593 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 KIAA1586Q9HCI6 787 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
SSR4-210ENST00000485612 IL17BQ9UHF5 180 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 CKAP5Q14008 2032 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
SSR4-210ENST00000485612 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
SSR4-210ENST00000485612 PPP6R2O75170 966 aa12.86□□□□□ -0.35
SSR4-210ENST00000485612 LDOC1O95751 146 aaPredicted RBP12.86□□□□□ -0.35
SSR4-210ENST00000485612 CDH8P55286 799 aa12.86□□□□□ -0.35
SSR4-210ENST00000485612 TNNC1P63316 161 aa12.86□□□□□ -0.35
SSR4-210ENST00000485612 DNAJC3Q13217 504 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms